Paucimonas lemoignei: NCTC10937_01414
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Entry
NCTC10937_01414 CDS
T05492
Symbol
recJ
Name
(GenBank) RecJ exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
plg
Paucimonas lemoignei
Pathway
plg03410
Base excision repair
plg03430
Mismatch repair
plg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10937_01414 (recJ)
03430 Mismatch repair
NCTC10937_01414 (recJ)
03440 Homologous recombination
NCTC10937_01414 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_01414 (recJ)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC10937_01414 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC10937_01414 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10937_01414 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
SQF97310
LinkDB
All DBs
Position
1:1571726..1573441
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AA seq
571 aa
AA seq
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MRIEPRTLPQTLPFLGDLPPLLTRLYAARGVLSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALNERQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRQPQLLMTVDNGISSVEGVAAAKAAGLQVLVTDHHLPGHELPAADAIVNPNQPGCTF
PSKALAGVGVIFYVLMALRARLRENGWFEANQRAQPNLGELLDLVALGSVADVVPLDTNN
RILVHQGLMRIRAGRARPGLKAILEVARRDHTRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCEDETLAREMAVQLDELNQDRKSIEQGMQREALAQLKDLPVESMPFGLCVFEPDWH
QGVIGILASRLKDRYHRPTIAFASAGEGVLKGSARSVAGFHIRDALDAVAARHPELISKF
GGHAMAAGLSLPEANFPAFAQAFDEEVRRQLQEEDLTGRLLSDGPLAVEEFHLELARALR
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKSECGTVKLDAIAFGVDRDIWPNPN
IRWVELAYKLDLNEFRGNETVQLMVAHIAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgaacctcgtacattgccgcaaaccctgccttttctgggcgacctgccgcct
ttgctgacccggctgtatgccgcacggggcgtgttgtcggaagccgagctggataaaagt
ctggcgcggctgatcccgtatcagcaactcaagggcatcgacgctgcggtggatttgctg
gtgacggcgctgaacgaacgccagcggattctcatcgtcggcgacttcgacgcggacggc
gccacggccagcaccgtgggtgtgctgggcctgaggttgctgggtgctgctcatgtcgac
tacctggtgcccaaccgtttcgaatatggctatggcctgaccccggaaatcgtcgccgtg
gcgttgcagcgtcagccgcagttgctgatgacggtggataacggcatttccagcgtcgaa
ggtgtggccgctgccaaggcagccggtttgcaagtgctggtcaccgatcaccacttgcct
ggccatgagttgccggccgctgacgccatcgtcaaccccaatcagcctggctgtacgttc
cccagcaaggcgctggccggtgttggcgtcatcttttacgtcctcatggccttgcgggca
cgtctgcgggaaaacggctggttcgaggccaatcaacgcgcccagcccaatcttggcgag
ttgcttgaccttgtggcgctgggcagcgtcgctgacgtggtaccgctggacaccaacaat
cgcatcctggtgcatcaaggcttgatgcgtattcgtgccggtcgcgcacgtccggggctc
aaggcgattcttgaagttgcccgtcgcgatcacacacgcatcacctccacggacctgggc
ttcatcctcggcccgaggttgaacgcggcggggcgtctggacgacatgagcctgggcatc
gaatgcctgctctgcgaagacgagaccctggcccgtgaaatggccgtgcagctggatgag
ctcaatcaagaccgcaaatccatcgagcagggcatgcagcgcgaggctttggcccagctc
aaggacctgcctgtggaatccatgccgttcgggctgtgtgtgttcgagccagactggcac
caaggcgtcatcggtatcctcgcgtcgcgcctcaaggatcgctaccaccgcccgaccatc
gcgttcgccagtgctggcgagggcgtgctcaaggggtcggcgcgctctgtggcggggttc
catatccgtgatgcactggacgctgttgcggctcgccatccggaactgatcagcaagttt
ggcgggcatgcgatggcggctgggctgtctttgcctgaggccaatttcccggctttcgcc
caggcgttcgatgaagaagtgcggcgtcagttgcaggaggaagacctgaccggtcgcttg
ttgtccgatggaccgctggcggtcgaggaattccatctggaactggcccgcgccctgcgt
aacgccggtccctgggggcagcatttccctgagccgttgttccatggcgtattccaactg
gtcgagcagcgggtcgtgggcgagcggcatttgaagatggtgctcaaaagcgaatgcggc
accgtgaagctggatgcgattgcctttggcgttgatcgggatatctggccgaaccctaat
attcgttgggtcgagctggcctacaagctggatctgaacgagtttcgtggcaatgaaacc
gtgcagctgatggttgcgcacatcgcgccgcgctag
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