Paucimonas lemoignei: NCTC10937_01482
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Entry
NCTC10937_01482 CDS
T05492
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03030
DNA replication
plg03430
Mismatch repair
plg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10937_01482 (dnaE)
03430 Mismatch repair
NCTC10937_01482 (dnaE)
03440 Homologous recombination
NCTC10937_01482 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plg03032
]
NCTC10937_01482 (dnaE)
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_01482 (dnaE)
Enzymes [BR:
plg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10937_01482 (dnaE)
DNA replication proteins [BR:
plg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10937_01482 (dnaE)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10937_01482 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
SQF97377
LinkDB
All DBs
Position
1:1649800..1653321
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLVKTLAGMNMPAVAVTDQNNLCSLVKFYKAAMGAG
IKPICGADLWLSNKDADASLSRISLLVMNAKGYRNLTELISRGFIEGQRNGQIIIERSWV
AEASEGLIALSAAKEGEIGMALLGGNPGEADQLLQEWMAVFPDRFYVEVQRTNRANDEEH
LHAAVALAERHGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SADEMAELFSDLPEALQNTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFEGL
EERLAVLWPKDTTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSAIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVDEPPLDIAFIPLDDAPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIDGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNISEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITEARQAGPFTDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFETEP
KAYQANIDRNRAVLLASLVEAIQAAEQTARSHDSGHMDMFGGLFVEEDTDVYANHRNAKE
GSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQALLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRLTVRAEALKGDRLRWLGELCKRHRGACPITLDYTGLDAKAL
LQFGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatattcgctggttgatggcctg
gttcgggtcaaaccgttggtcaagaccctggctggcatgaacatgcctgccgtggcggtg
accgatcagaacaacctgtgttcgctggtcaagttctacaaggcggccatgggcgcgggc
atcaagccgatctgtggcgctgacctgtggctttcaaacaaggacgctgacgcttcactg
agtcgcatcagcctgctggtgatgaacgccaagggctaccgcaacctgaccgagctgatc
tcccgtgggtttatcgaaggtcagcgtaatggccagatcatcatcgagcgttcctgggtc
gccgaagccagcgaagggctgattgccctgtccgcggccaaggaaggcgagattggcatg
gcgctgctggggggcaaccccggtgaggccgatcagttgctgcaggagtggatggcagtc
ttccccgaccgcttctatgtggaggtgcagcgcaccaaccgcgccaacgacgaggaacac
ctgcacgccgctgtcgctctggccgaacgccatggcgcaccgttggtagcgaccaacgat
gtgcgtttcatcaagcaggaagatttcgaggcccacgagactcgtgtctgcatcggcgaa
ggccgcgcgctggatgacccgcgccgctctcataactacagcgatcagcagtacctgaaa
agcgccgacgaaatggccgagctgttcagtgacctgcccgaggcgctgcagaacaccgtc
gaaatcgccaagcgctgcaatattgacgtaaagctgggcactcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgatgagtatttccgcaaggtgtctttcgaaggtctg
gaagaacgcctggccgtgctgtggcccaaggacaccactcctgactacgaagccaagcgc
caggtctatgttgaccggctgaatttcgagctggatatcatcattcagatgggcttcccc
ggttacttcctgatcgtgatggacttcatccagtgggccaagagcaatggcgtgccggtc
ggacctggccgggggtcgggcgccggttcccttgtggcgtatgtacagaagatcactgac
ctcgacccgctggaatatgacctgctgttcgaacgcttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggatggtcgtgaccgggttatcgattacgtg
gccgagaagtacggccgtaatgcggtgagccagatcatcacctttggttccatggccgcc
aaggcggtggtacgggacgtggcgcgagtccagggcaagtcctacgggctggcggatcgt
ctgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gagatcctgcgcgacttcctcaaggttgatgaagaagccgccgaaatctgggaaatggcc
cgcaagcttgaaggcgttgtgcgtaacgtcggtaaacacgccggtggtgtggtaatcgcg
cccaccaagctgactgacttctccgccatttattgcgacgaagaaggtgacggcctggta
acccagttcgacaaggacgacgtcgaggccgccgggttggtgaagttcgacttcctcggc
ctgcggaccctgaccatcatcgactgggcgctgaaaaccattaaccgcgaccgcgccaag
gtcgatgagccgccgctggatatcgcgttcattccgctggacgatgcaccgacctaccag
ttgctgcaaaaagcggaaaccacagcggtgttccagcttgaatcccgaggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttt
cgtccgggcccgctgcagtcaggcatggttgacgacttcatcaaccgtaaacacggccgt
gccgaactgtcttacccccacgtggactaccagtacgaaggcctcaagccggtactggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcgcaggtcatggcc
ggttacaccctcggcggcgctgacatgctgcgtcgagccatgggtaagaaaaagcctgag
gaaatggccaagcagcgcggcggtttcattgacggttgcaagaccaacaatatcgaccct
gatctggccggtaacattttcgacctggtagagaaattcgccggttacggtttcaacaag
tctcactctgccgcctatggcctggtgtcgtaccagaccgcctggctgaagacgcattac
ccggcaccgttcatggcggccgtgctttcagcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcggaccatgaagctgcgcctggatgcgccggatgtgaacatc
tccgagttcaagttcacggtcagcgacgatggccgcattctgtatggccttggcgccatc
aagggtgtgggtgaaggcccggttgaagccattaccgaagctcgtcaggccgggccgttc
acggatctgttcgatttctgcgcccgcgtagacctcaagcgcgtcaacaagcgaaccctg
gatggcttgattcgcagtggtgcgctggatcgcctgggtccgtacttcgagactgagcca
aaagcctatcaggccaacatcgaccgcaaccgtgcggtgttgctggcctcgctggtagaa
gctattcaggccgcagagcagactgcacgtagccacgacagcggtcacatggacatgttt
ggcggtttgttcgtcgaggaagacaccgacgtctacgccaaccatcgcaatgccaaagaa
ggtagcctcaaggatcggctgcgcggtgagaaggaaaccctggggctttacctcaccggt
cacccgatcgacgaatacgaaggcgagattcgccgcttcgcccggcaacggatcatcgac
ctcaaaccggcacgggatacccagacggttgcggggctgatcatcgcgctgcgggtcatg
aagaacaagaagggcgacaagatggggtttattaccctggacgatcgctcggggcgtatt
gaagcctcgctgtttgccgaggcttttcactcagcccaggccttgctgcagaccgacgcg
atggtggtggtcgaaggtgaggtcagcaacgatgatttttccggtggcctgcgtctgcgt
gccaaacgggtgatgagcattgaagatgcccgcaccaatctggctgaaagcctgcgcctg
accgtgcgcgcagaagccctcaagggcgatcggctacgctggctgggtgagctgtgcaaa
cgccatcgcggtgcgtgcccgattaccctggattacaccggcctggatgccaaagccttg
ctgcagtttggtgaagcctggcgaatagaccccgcagatagcctgattcaggcactgcgt
gaccagttcgggcgtgagaacgtcttcctgcagtatcgttga
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