Paucimonas lemoignei: NCTC10937_01494
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Entry
NCTC10937_01494 CDS
T05492
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plg03016
]
NCTC10937_01494 (truD)
Enzymes [BR:
plg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NCTC10937_01494 (truD)
Transfer RNA biogenesis [BR:
plg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10937_01494 (truD)
Prokaryotic type
NCTC10937_01494 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GA_3
E3_binding
Motif
Other DBs
NCBI-ProteinID:
SQF97389
LinkDB
All DBs
Position
1:1665099..1666157
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AA seq
352 aa
AA seq
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MTESELLGPCAYGVALGSAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPDMSAAENETLKILNSTRHKR
KLQRGAHAANGFTLRLTQLNADKDALQARLESIAKAGIPNYFGAQRFGYEGGNLGEARDY
ASRQALPEQRAVRSRLLSTARSYLFNQVLAARVADGSWQQAQVGDLLAFTDSRSFFPAGI
EECSDPRLAILDLHPTGPQWGAGQSPASGATATLENEVAERESALRDWLTRAGMEHERRI
LRLPIGGLTWHYPEPDILQLEFVLPPGCFATALVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatccgaactgctgggcccgtgcgcgtatggcgttgcactgggcagtgccgtg
ctcaaggccaccgctgaagatttccaggtcgatgaagtgctcgacattccattgtccggc
gatggcgagcacctgtggttgtgggtcgagaaacgtggcctcaacaccgaagaagctgcc
cgccgtctggcccgcgccgcaggcgtgcagcttcgcacggtcagttacgcaggcctgaaa
gatcgtcaggcattgacccgtcagtggttcagcattcagctgccaggcaaggccgatccc
gatatgtcggcggctgaaaatgaaaccctgaagattctcaacagcactcgccacaagcgc
aaattgcaacgcggtgctcatgcagcaaacggcttcaccttgcgcctgacgcagctcaac
gccgacaaggacgccctgcaggcgcgtctggagtcgattgccaaggctggtatcccgaat
tatttcggtgcccagcgtttcggctatgaaggcgggaacctcggtgaggcgcgtgactat
gcttcgcgtcaggcattgccggaacagcgcgcggtgcgttcgcgcctgttgtccacggcg
cgcagctacctgttcaatcaggtgctggcagcgcgtgtggcggacggcagctggcaacag
gctcaggtcggcgatctgctggcattcaccgacagccgcagtttttttccggctggcatc
gaggagtgcagcgacccacggctggcgattcttgacctgcaccccacgggtccgcagtgg
ggggcaggccaatcgccagcctctggagcgactgctaccctggaaaatgaggtcgccgaa
cgcgaatctgcactgcgtgactggctgacaagagcgggaatggaacacgaacgtcgcatc
ctgcgtctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtccttccgcccggatgcttcgccactgctttggtacgcgaactcgttgatctg
gtgccggttgggcagacggacagcccatgcgtattctga
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