Paucimonas lemoignei: NCTC10937_01516
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Entry
NCTC10937_01516 CDS
T05492
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plg03009
]
NCTC10937_01516 (rimO)
Enzymes [BR:
plg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC10937_01516 (rimO)
Ribosome biogenesis [BR:
plg03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC10937_01516 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
SQF97410
LinkDB
All DBs
Position
1:complement(1685053..1686396)
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYQDADVVVVNTCGFIDA
AKAESLEVIGDAIKENGKVIVTGCMGVDESVIRDVHPSVLSVTGPQQYEQVVNAVHDAAP
PNLDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDIKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDIK
QDRWDRFMAHQQAISAARLQMRIGREIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIGLEE
GSTVKPGDKIMCRVTDADEYDLWAETI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaccacgccatccgcccccaaggttggattcgtcagtctgggttgcccg
aaagcactcgtagattccgaacgcatcctcacccaactgcgcatggaaggttatgaagtc
gtcgcgacctatcaggacgcggacgtcgtcgtggtcaatacctgtggtttcatcgacgcc
gccaaggcagagtcgcttgaagtgatcggcgacgccatcaaagagaacggcaaggtcatc
gttaccggctgcatgggcgttgatgaaagcgtgatccgtgacgttcacccgagcgtgctc
tctgtgacgggcccgcagcagtacgaacaagtggtcaacgccgtccatgacgccgcgcca
ccgaatcttgatcacaacccgctgatcgacctggtgccgcctcagggtgtcaagctgacc
ccgcgccactacgcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtccatgcgcggcaagctggtcagccgaccggtgggtgacgtgctcgacgaa
gcccagcgcctggtcaagtctggcgtgaaagagctgctggtgatttcccaggacaccagc
gcttacggcgtcgacatcaaataccgcaccggcttctggaatggtgcgccggtcaagacg
cgcatgaccgaactgtgcgaagccctcagctccctgggtgtgtgggtgcgcctgcattac
gtttatccgtacccgcacgtggacgagctgatcccgctgatggccgcggggaaaatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaaatcctcaagctgatgaagcgc
ccggctttcgaagacaagaccctggcgcggatcaagaactggcgcgagcagtgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccctggcgaaaccgaagaagatttccag
tacctgctggactggctcaccgaagcacaactcgaccgcgtgggctgcttccagtactcg
ccggttgaaggcgcgcccgccaacctcttggacgccgccatcgtgccggacgacatcaag
caggaccgctgggatcgtttcatggctcaccagcaggcgatcagcgcggcacgtctgcaa
atgcgcatcggccgggaaatcgaagtgctgatcgacgaagtcgacgagcaaggcgccgtt
ggccgctgcttcttcgatgcaccggaaatcgacggcaacgtgttcatcggccttgaggaa
ggcagcacggtcaagccgggcgacaagatcatgtgccgggtcaccgacgctgacgaatac
gacttgtgggccgagactatctga
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