Paucimonas lemoignei: NCTC10937_01789
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Entry
NCTC10937_01789 CDS
T05492
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_01789 (sbcC)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10937_01789 (sbcC)
Archaeal homologous recombinant proteins
NCTC10937_01789 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
CC_Bre1
nSTAND_NTPase5
AAA_15
Mu_Gam-Sipho_Gp157-TOTE
nSTAND3
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
SQF97670
LinkDB
All DBs
Position
1:complement(1988452..1992096)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSRVPEIDGDISTNDPRTLLRRGTGSGYAEVDFVGIDKRRYRARWETNRARDNAA
KKLQASRQTLTDLDSDQILSTQNKTEYKTMLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTDTAIYSQLGRRAFSKSREAEKVHDDLKLMATGIAPMPPEQRAELEQRF
SEAQQQLKSHQAVQRQLELKQQWLTELQRLRDEHLSASEQLNSAQQDWDNQSGQRQLLGQ
LERLAPQRHLFAQRNRLDAQLSPLSAQITEHAQRQSELHTRQTALEEKLQTANGALEQAE
QQKKAAAPIIGQAFEQQGNLSHLNKEVQDALVQAQAADRAKADGQTALNQLLDQQRLQDA
RLQAIAVQLEKSAVLAPLSQAWKAYRPRLQEAVKLNARLNKGREELPELEKNSTRAEQEL
TDRRNALQTLYSEAQVKAEAVTAEIQRLGQLLQDNRQQHAGYDSLERIWQRHQDIDSRLR
DVELQQQQANERRTQAIASGLQLKTEHEAAELALKTTVELLQRQRLARSASVEELRGQLI
DDQPCPVCGSQEHPYHQSDALLQALSGHDDSEETSARLKVSQLAEKLVELRSEVTELNAR
LKQARPQLEQLTEQLQKLTPELEAHALYPRLLEQPELQRADWLSERLHTLREEIASSEQR
QSLLLKVQQQAEQLQQNVQTARDASQQAMKMLDDQQRNIALDNQAFEAALQEFEPLLPAE
SLPRWREAATDSFMQLDNDIAQRLEQLDRQQDEQQEHSERARKIEREQDNQHNLEQTRVQ
QQQRLTALQTQQAATQQRLGDMLGEHASAEYWQQQLETALEQARGAQGSASEALQQGRSE
LIKLATGLESEQARLQELQHEFAELNQQITQWRANHAELDDTALDALLGYSDESVSQVRQ
QLQQADKNLEQSRILLQERDKQVQQHQAHHSDVGDTAQLNAALLDAQKSSADHEQHCAEL
RAQLSEDERRNNASRELQEQIASAHAEYLRWARLAALIGSAEGDKFRKIAQAYNLDLLVH
HANAQLKQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIQV
RRQGNGLSTVEVSH
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccatccgcctgaagaatctcgcctcactggccgggccattcgaactg
gatttcactgctgaaccgctggccagcgccgggctgttcgccatcaccgggccaaccggc
gcgggcaagagcaccttgctcgatgccttgtgcctggcgctgttcggggcgattccgcgc
ctgagcaatatcggccagtcccgggtgccggaaatcgacggcgacatcagcaccaacgac
ccgcgcaccctgctgcgccgtggtacgggcagtggttacgccgaagtggatttcgtcggc
atcgacaaacgccgttaccgcgcccgttgggaaaccaaccgcgcccgggacaacgctgcg
aagaaactccaggccagccgtcagaccctgactgatctggacagcgaccagatcctcagc
actcagaacaagaccgaatacaagacgatgctcgaagcccgcctgggcctgaatttcgag
caattcacccgtgccgtgatgcttgcccagagtgagttcagcgccttcctcaaggccgat
gacaaggaacgcagcgagctgttggaaaagctcaccgacacggcgatctacagccagctg
ggccgccgcgccttcagcaaaagccgggaggcagagaaggtccacgatgacctcaagctc
atggccaccggcatcgcgccgatgcccccagagcagcgcgcggaactggagcaacgtttc
agcgaggcccagcagcaactcaagagccaccaagccgtgcagcgccagctggagctcaag
cagcaatggttgactgaactgcagcgcctgcgcgacgaacacttgagcgccagcgaacag
ctaaatagcgctcagcaggactgggacaaccagagtggccagcgccagctcttgggccag
cttgagcggcttgccccgcaacgccacctgttcgctcaacgcaaccggctcgacgcccag
ttgagcccactcagcgcgcagatcaccgaacatgcgcaacgtcagagcgagctgcacacg
cggcagaccgcgctggaagaaaaactccagaccgccaatggcgcgctggaacaggccgag
caacagaaaaaagccgccgccccgatcatcggccaggccttcgagcagcagggcaacctc
agccacctcaataaagaagtgcaagatgccctcgttcaagcccaggctgcggaccgcgcc
aaggctgacggccagaccgcactcaatcaactgcttgatcagcaacgcctgcaggatgcg
cgcctccaggcaattgccgttcagctggaaaaaagtgcagtgctcgcgccgctcagccag
gcctggaaagcctaccgaccgcgcttgcaggaagcggtaaaactcaacgcacgcttgaac
aagggccgcgaagaactgccggagctggagaaaaattcgacccgtgccgagcaggaactg
actgatcgacgcaatgccctgcaaacgctctacagcgaagctcaggtcaaggccgaggcg
gtcactgccgagatccagcgcctgggtcagttgttgcaggacaaccgccagcaacacgct
ggctacgattcgctggagcgcatctggcagcggcatcaggacatcgacagccgcctgcgg
gacgtcgaactgcaacagcagcaggccaacgagcgacgcacgcaggcgatcgccagcggc
ctgcaactgaaaaccgaacacgaagccgcagaactggcacttaaaaccacggttgaactt
ctacaacgccaacgcctggcccgcagcgccagcgttgaagaattgcgcggccagttgatc
gatgatcagccgtgcccggtgtgtggcagccaggagcatccttatcaccagtccgacgcg
ctgctccaggcgctgtccggccatgacgacagcgaagaaaccagcgcgcggctcaaggtc
agccagctcgcggaaaagctcgtcgagttgcgcagcgaggttaccgagctcaacgcccgc
ctcaagcaagcccgaccccagttggagcagctcaccgagcaactgcagaaactcactccc
gaacttgaagcccatgcgctgtacccgcgtctgctggaacagcccgagctgcaacgcgct
gactggctgagcgaacggctgcacaccttgcgcgaagaaatcgccagcagcgagcaacgc
cagagcctgctgctcaaggtgcaacaacaggccgagcagttgcagcagaacgtgcaaacc
gcgcgcgatgccagccagcaagcgatgaagatgctcgacgaccagcagcgcaatatcgca
ctggacaaccaggccttcgaagctgcgctacaggagttcgagccgttgttgcccgccgaa
agcctgccgcgctggcgtgaggcggccacagacagtttcatgcaactggacaacgacatc
gcgcaacgcctggaacagctggaccgccagcaggatgaacagcaggaacacagcgagcgc
gcccgcaagatcgagcgcgagcaagacaaccagcacaaccttgagcagacgcgggtccag
cagcaacaacgcctcacggcgctgcaaacccagcaagcggccactcagcaacgtcttggc
gacatgctgggcgaacatgccagcgccgagtattggcaacagcagcttgaaaccgcgctg
gaacaggcgcgcggtgctcagggcagcgccagcgaggcgttgcaacagggccgcagcgag
ctgatcaaactggccaccggtcttgaaagcgagcaagcgcgtttgcaagagctgcaacac
gagttcgccgagctgaatcagcagatcacccaatggcgcgccaaccatgcggagctggac
gataccgccctggatgccttgctgggttacagcgacgagagcgtcagccaggtgcgtcag
cagttgcagcaagccgacaaaaacctcgaacagagccgcatcctgctgcaggagcgcgac
aagcaagtgcagcagcatcaagcgcatcacagcgacgtcggtgatactgcgcagttgaat
gcagccttgctggacgcacagaaatccagcgccgatcacgaacagcactgcgccgagctg
cgcgcacaactgagcgaagacgagcgccgcaacaacgccagccgcgagttgcaggaacag
atcgccagcgcccatgcggagtacctgcgctgggccaggctggcggcgctgatcggttcg
gctgagggcgacaaattccgcaagattgcccaggcctacaacctcgacctgctggttcat
cacgctaacgcgcaactcaagcaactggtgcgtcgctatcgcctcaagcgcggcggcagc
atgctgggcctgctcgtgatggacacggaaatgggcgacgaactgcgctcagtgcattcg
ctgtccggtggcgaaacttttctggtgtcgctggcgttggccctcggcctggcgtcaatg
gcgtccagcacgctaaagatcgaatccttgtttatcgacgaaggctttggcagcctcgac
ccggaatccctgcagttggccatggatgcgctggatggcttgcaggctcagggtcgcaag
gtcggggtgatttctcatgtgcaggaaatgcacgaacggattccggtgcagattcaggtc
cgccgtcagggcaatggcttgagcaccgtggaggtcagccactga
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integrated database retrieval system
