Paucimonas lemoignei: NCTC10937_01854
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Entry
NCTC10937_01854 CDS
T05492
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00071
Fatty acid degradation
plg00280
Valine, leucine and isoleucine degradation
plg00310
Lysine degradation
plg00362
Benzoate degradation
plg00380
Tryptophan metabolism
plg00410
beta-Alanine metabolism
plg00640
Propanoate metabolism
plg00650
Butanoate metabolism
plg00907
Pinene, camphor and geraniol degradation
plg00930
Caprolactam degradation
plg01100
Metabolic pathways
plg01110
Biosynthesis of secondary metabolites
plg01120
Microbial metabolism in diverse environments
plg01200
Carbon metabolism
plg01212
Fatty acid metabolism
Module
plg_M00087
beta-Oxidation
plg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC10937_01854 (fadJ)
00650 Butanoate metabolism
NCTC10937_01854 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC10937_01854 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC10937_01854 (fadJ)
00310 Lysine degradation
NCTC10937_01854 (fadJ)
00380 Tryptophan metabolism
NCTC10937_01854 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC10937_01854 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC10937_01854 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC10937_01854 (fadJ)
00930 Caprolactam degradation
NCTC10937_01854 (fadJ)
Enzymes [BR:
plg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC10937_01854 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC10937_01854 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC10937_01854 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
SQF97735
LinkDB
All DBs
Position
1:2061414..2063558
Genome browser
AA seq
714 aa
AA seq
DB search
MTDAIKYDKGQDDIVVLTIDMPGHRANLMNAAWREAMAATLARLQEEKDSITGVIITSGK
DTFFAGGDLDELIQVSKDRAQWFEAMIFGLKQQLRGLETLGKPVVAAINGSALGGGFEIC
LACHHRIALDVPGLQIGFPEVTLGLLPGGGGVVRLVRMLGLEKALPHLLESKALKPQPAL
KAGLIDDIALDHDDMLTRARAWIAANPTATQPWDGPGYQIPGGTPSHPKVAQMLAIAPSI
LRNKTQGCYPAPEKILCAAVEGAQVDFDTAHLIETRYFTELVTGQVAKNMIGTFWFQLNA
IKQGGSRPARFPLIATRKVGVLGAGMMGAGIAYVSACAGIDVVLKDVNLAAAQKGREHSA
RLLAAQVASGRLGAAQSEIILARIHSTGRDSDLEGCDLIIEAVFEDRELKGQVSAAAEHV
ALKNAVIASNTSTLPITGLASAISNPERFIGLHFFSPVEKMQLVAIIKGAQTSDATLARA
FDFVRQIKKIPIVVSDSRGFFTSRVFATFTNEGIAMLDEGVAAPMIETEARKAGMPVGPL
AVSDEVSLSLMSHIRRQTAKDLAAEGKPAPQHPATALIDLMVDAFKRPGKAAGGGFYDYP
PDAPKQLWPELKTRFEKADGQIPAQDVRDRLLFIQALETVRCLEEGVLHSVADANIGSIF
GIGFAGWTGGALQYINQYGLQAFIARAQVLAQRYGERFEPPSLLLHKALKGEVF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgattaaatacgacaaaggccaggacgatatcgtggtcctgacgatcgat
atgcctgggcaccgcgccaatctgatgaacgccgcctggcgcgaagcgatggctgcgacc
cttgccaggctgcaggaagaaaaagactcaatcaccggcgtgatcatcacgtcgggcaag
gacaccttcttcgccggtggcgatctcgacgaactgatccaggtgagcaaggatcgcgcg
caatggttcgaggccatgatttttggcctgaaacagcaacttcgcgggctggagaccctc
ggcaaaccggtggtggctgcaataaatggttccgcgctggggggtggttttgaaatctgc
ctggcctgccatcaccgcatcgcactggatgtccccggcctacagatcggcttcccggaa
gtgacgcttgggttgttgcccggtggcggcggggtagtgcgtcttgtgcgaatgctcggg
ctggaaaaagcactgccgcatttgcttgaaagcaaagcgctaaagccgcagccggcgctc
aaggctgggttgattgacgacatcgccctcgatcacgacgacatgctcacccgagcgcgg
gcgtggatcgcggccaacccgacggccactcagccgtgggacgggccgggttaccagatc
cccggcggcacgccatcgcaccccaaagtagcgcagatgctggccattgcgccgtcgatt
ctgcgcaacaagacgcaaggctgctatccggcgccggagaagattttatgtgccgccgtc
gaaggcgctcaggtggacttcgacaccgcgcacttgattgaaacccgctacttcaccgag
ctggtaaccggtcaggtcgccaagaacatgattggcaccttctggtttcagctcaatgct
atcaagcaagggggctcgcgaccggcgcggttccccttgatcgccacccgcaaggtcggc
gtgctcggcgccggaatgatgggcgcggggattgcgtatgtcagcgcctgtgcgggcatc
gacgtggtgctcaaagacgtcaacctggcggcggcgcagaagggcagagagcattcggcg
cgcttgttggctgcccaggttgccagtggcaggcttggcgcggctcaaagtgaaatcatt
ctggcgcgcattcacagcaccgggcgggattcagatttagagggctgtgatctgatcatc
gaagccgtgttcgaagatcgtgaactcaaaggccaggtcagcgctgctgcggagcacgtg
gcgctgaaaaatgcagtcattgcctctaatacatcaacgctgcccatcaccgggctggcg
tcggcgatttccaaccccgagcgtttcatcggcctgcatttcttcagccccgtggaaaaa
atgcagctggtggcaatcatcaagggcgcccagaccagcgacgcgacactggcacgtgct
tttgacttcgtccggcagatcaagaaaatccctatcgtggtcagtgacagccgtggcttc
tttacctcgcgggtgttcgccacctttaccaacgaaggcattgcgatgctggatgagggc
gttgccgcgccgatgatcgaaaccgaggcacgcaaggcgggcatgccagtcgggccgctg
gcggtgtccgacgaagtgtccctgagcctgatgagccacattcggcggcagaccgctaaa
gacctggccgccgaaggcaagcctgcgccacagcatccggcaaccgccttgattgacctg
atggtcgacgcgttcaagcgtccaggcaaggcagcgggcggtggcttctacgactacccg
ccagacgcacccaaacagctgtggcctgaattgaaaacacgcttcgaaaaggccgacggg
caaatcccggcacaagacgtgcgtgaccgcttgctgttcattcaggccctggaaaccgtt
cgctgtctggaagagggcgtgttgcactcggtcgccgacgccaacatcggttctatcttt
ggtatcggctttgcgggctggaccggtggcgcgttgcagtacatcaatcaatacggcctg
caggcgttcatcgctcgggcgcaggtactggcgcagcgctacggcgagcgcttcgagccg
ccatcgctgctgttgcacaaggcgctcaagggcgaggtgttttaa
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