Paucimonas lemoignei: NCTC10937_01944
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Entry
NCTC10937_01944 CDS
T05492
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00071
Fatty acid degradation
plg00280
Valine, leucine and isoleucine degradation
plg00310
Lysine degradation
plg00362
Benzoate degradation
plg00380
Tryptophan metabolism
plg00410
beta-Alanine metabolism
plg00640
Propanoate metabolism
plg00650
Butanoate metabolism
plg00907
Pinene, camphor and geraniol degradation
plg00930
Caprolactam degradation
plg01100
Metabolic pathways
plg01110
Biosynthesis of secondary metabolites
plg01120
Microbial metabolism in diverse environments
plg01200
Carbon metabolism
plg01212
Fatty acid metabolism
Module
plg_M00087
beta-Oxidation
plg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC10937_01944 (fadB)
00650 Butanoate metabolism
NCTC10937_01944 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC10937_01944 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC10937_01944 (fadB)
00310 Lysine degradation
NCTC10937_01944 (fadB)
00380 Tryptophan metabolism
NCTC10937_01944 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC10937_01944 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC10937_01944 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC10937_01944 (fadB)
00930 Caprolactam degradation
NCTC10937_01944 (fadB)
Enzymes [BR:
plg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC10937_01944 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC10937_01944 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC10937_01944 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NCTC10937_01944 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
SQF97824
LinkDB
All DBs
Position
1:2167849..2169996
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNDLRQAVDSIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPEAELLAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVMSSSAKIGLPEVKLGLYPGFGGTVRLPRIVGADNAIEWIASGKENRAEDAL
KVGAVDAVVAPEKLQEAALDLIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKVYDEVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREDAIQLGLNEASKL
LGNRVEKGRLTAPKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEAQVG
EDTILASNTSTISISLLANALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYDANRLGQKNGKGFYAYETDKKGKP
KKVTDSAVLEILKPVIYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSVGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgatctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaacgacctg
cgtcaggccgtggattccatcaaggctgatggttcgatcaagggtgtgatcgtcaccagc
ggcaaagacgtgtttatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagttg
cctgaagcagagctgcttgccggcaatctggaagccaaccgtatcttcagcgatttcgaa
gaccttggcgtaccgaccgtagtggccatcaacggtatcgcgctgggtggcggcctggaa
atgtgcctggctgcggattaccgcgtcatgtccagcagcgccaagatcggcctgcctgaa
gtcaaactaggcctctaccccggctttggtggcaccgttcggctgccgcgtatcgtcggt
gctgataacgccatcgagtggattgcatccggtaaggaaaaccgcgccgaagacgccctg
aaagtcggcgcagtcgatgccgtggtcgcgccggaaaagcttcaggaagccgctctggac
ctgatcaagcgcgccatctctggcgagttcgattacaaagccaagcgtcagccgaagctg
gaaaaactcaagctcaacgctatcgaacaaatgatggccttcgaaaccgcgaaagggttc
gtagccggtcaggcagggccgaactatccagctccggtcgaagcgatcaagaccattcag
aaagcggccaacttcggtcgtgacaaggcgcttgaaattgaagccgccggtttcgtcaaa
atggccaagacctctgcagcgcagagtctgatcggcctgttcctgaatgatcaggagctg
aaaaagaaagccaaggtctacgacgaagtcgccagagacgtgaagcaggctgcggtactc
ggcgctggcatcatgggtggcggtattgcctatcagtcggctgtcaaaggcacgccgatc
ctgatgaaggacattcgtgaagacgccattcaactgggcctgaacgaagcgtccaagctg
ctgggcaaccgcgtcgaaaaaggccgtttgaccgcgccgaagatggctgaagcgctcaat
gcgattcgcccgacgctgtcctacggcgatttcggcaacgttgacctggtggtcgaggct
gtcgtcgagaatccgaaagtgaagcaggccgtgctggctgaagtcgaagctcaggtgggc
gaagacacgattctggcttccaacacctcgaccatttccatcagcctgttggccaatgcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcattcgtggcgagaagtccagcgagctggcgattgcgaccaccgtggcc
tacgccaagaaaatgggcaagaacccgattgtggtcaatgactgcccgggctttttggtc
aatcgcgtgctgttcccgtatttcggcggtttcgccaagctggtcagcgccggtgtggat
ttcgtgcgcatcgacaaagtcatggaaaagtttggctggccaatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccatggtcgtgacgtcatggccgaaggcttc
ccggatcgcatgaaggacgaccgtcgttcggctatcgatgttctctacgacgccaaccgt
cttggccagaaaaatggcaaaggcttctacgcctacgagaccgacaagaagggcaagccg
aagaaggtcactgactcggccgtgcttgaaatcctcaagccagtcatctacgaacagcgc
gaagtgtccgacgaagacatcatcaactggatgatgatcccgctgtgcctggagaccgtg
cgttgcctggaagacggcatcgtcgagaccgccgccgaagccgatatgggcttgatctac
ggcatcggtttccctccgttccgcggtggtgcgttgcgctacatcgactccgttggtgtc
gctgaattcgttgccctggccgatcaatatgctgatttgggcgctctgtaccacccgacc
gcgaagctgcgtgagatggccaaaaacggccagagctttttcggttga
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