Paucimonas lemoignei: NCTC10937_02030
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Entry
NCTC10937_02030 CDS
T05492
Symbol
fecI_2
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_02030 (fecI_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_02030 (fecI_2)
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10937_02030 (fecI_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_38
HTH_23
DUF2774
HTH_28
HTH_24
Motif
Other DBs
NCBI-ProteinID:
SQF97910
LinkDB
All DBs
Position
1:complement(2259367..2259876)
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AA seq
169 aa
AA seq
DB search
MSSADPSLQHAVHTLYVDHHHWLCGWLRKRLGCVDRAADLAQDTFIRVLTQRKSVELREP
RAYLSTVARSLMIDMFRRRALEQAYLETLAARPESLDVSPETRFMIIETLVEIDRLLDGL
GPRTREIFLMAQLDGLSYVDIGRHLNVSVNTVKKHAARALTHCLLSVED
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccgatccgtcgctgcaacacgcggtgcatacgctttatgtggaccatcat
cattggctgtgcggatggctgcgcaaacggctcggctgtgtagaccgcgccgcagacctt
gcccaggacacttttattcgcgtcctgacccagcgcaaaagtgtggagcttcgcgaaccc
cgggcctacctcagcaccgtcgcgcgcagcctgatgatcgacatgttccgtcgccgggcg
cttgagcaagcctatctggagaccctcgcagcgcgccccgagtcgctggatgtctccccg
gaaacccgtttcatgatcattgaaacgctggtggaaattgaccgcttgctcgatggcctt
ggcccgcgcacccgcgagattttcctgatggcgcagctggacggtctctcatacgtggac
atcggccgacacctcaatgtctcggtaaataccgtaaaaaaacacgctgccagggcactg
acccattgcttgctgtctgtggaagactga
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