Paucimonas lemoignei: NCTC10937_02251
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Entry
NCTC10937_02251 CDS
T05492
Symbol
ybiS
Name
(GenBank) ErfK/YbiS/YcfS/YnhG
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plg01002
]
NCTC10937_02251 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plg01011
]
NCTC10937_02251 (ybiS)
Peptidases and inhibitors [BR:
plg01002
]
Cysteine peptidases
Family C82
NCTC10937_02251 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
plg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC10937_02251 (ybiS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
SQF98127
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All DBs
Position
1:2514826..2515794
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AA seq
322 aa
AA seq
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MLSRIPAVTRCLSLAALCAAGSVSALEFPLPPPGEDIIGQVQTVTARYEDTFADLGTQYD
LGYLEMIAANPGVDPWLPGAGTQIVLPTRFVLPPGPREGIVINLAEYRMYYFPKGQNVVH
TYPLGVGREGWGSPIGVTKVIAKTPNPTWTPPASIRAEHAADGDPLPNVVPAGPDNPLGP
FKFGLGMSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELAEMAPVGTTVRIISEPYKFG
LSGGKVYLEAHTPVDDNGNPSVVDKHTAVINALLKREDLSNNLRMNWDLVRDVVAAEDGM
PVEIAVPGAPVTAGVQDQVPFQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcataccagccgttacccgctgtttgtcgcttgctgcactgtgtgcggcg
ggctccgtttccgctctggaattccctctgccgccgccgggtgaagacatcattggccag
gtgcagacggtcacggcgcgatacgaagacacctttgccgacctgggtacccagtacgac
ctgggttatctggaaatgatcgctgccaatccgggcgtcgacccctggctaccgggtgca
ggcacgcagatcgttctgccgacccgcttcgtgctgccacccggcccgcgcgaagggatt
gtgatcaacctggctgaataccgcatgtactacttcccaaaagggcagaacgtcgtgcac
acctatccattgggtgttggccgtgaaggttggggttcgccgattggtgtcaccaaggtg
atcgccaagacgccaaacccgacctggacacctccggcctcgatccgcgccgaacatgcc
gctgacggcgatccactgcccaacgtcgtgcctgccgggccggacaaccctctggggccg
ttcaagttcggcctggggatgtctggctacctgatccacggttccaacaagaagttcggt
atcggcatgcgcaccagccatggttgcttccgcatgtataacaacaacgtgctggaattg
gcagagatggcgccggtgggcactaccgtgcggatcatcagcgagccgtacaagtttggc
ttgagtggtggcaaggtctacctcgaagcgcacacgcctgttgatgacaacggtaatccg
tcggtggtcgacaagcatacggcggtgatcaatgcgttgctcaagcgcgaagatttgtcg
aataacctgcgcatgaactgggatctggtgcgggatgtggtggcggctgaggatggcatg
ccggtggagattgcggtgccgggtgctccggtgacggcgggtgtgcaggatcaggttccg
tttcagtga
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