Paucimonas lemoignei: NCTC10937_02295
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Entry
NCTC10937_02295 CDS
T05492
Symbol
xthA_1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10937_02295 (xthA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_02295 (xthA_1)
Enzymes [BR:
plg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC10937_02295 (xthA_1)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC10937_02295 (xthA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
SQF98170
LinkDB
All DBs
Position
1:complement(2559775..2560563)
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AA seq
262 aa
AA seq
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MSTVKIATFNINGVRARLPILLSWLERESPDVVCLQELKATDLAFPIDEIREAGYGAIWQ
GQTSWNGVAILAKGMEPLEIRRGLPGNEKDTQSRYLEAAAHGVIVGCLYLPNGNPQPGPK
FDYKLAWFEKLIEHAASLYASGHPVVLAGDYNVVPTDEDIYNTRSWLKDALLQPESRECF
QRLMSQGWTDAIRACFPDERIYTFWDYFRNHWQTNSGLRIDHLLLNAETSARLQLAGVDH
WPRNEPHASDHAPTWIELDMAG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgtgaaaatcgccaccttcaacatcaatggcgttcgtgcccgcttgccgatt
ctgctgagctggctggagcgtgaatcgccggatgtggtttgcctgcaagaactgaaggcg
accgacctggccttccccatcgatgaaattcgcgaagccggttacggggcgatctggcag
ggtcaaacgtcctggaacggcgtggcgattctggccaagggcatggagcctctggagatc
cggcgcggtttgccgggcaatgagaaagacacccagagccgctatctggaagccgccgcc
cacggcgtcatcgtcggttgcctgtacctgcccaatggcaacccccagccggggcccaag
ttcgattacaagctcgcctggttcgaaaaactcattgagcatgcggcctcgctgtacgcc
agcgggcacccggtggtgttggcaggcgattacaacgtggtgcccaccgatgaggacatc
tacaacacccgctcgtggctcaaggatgcgttgttgcagccagagagccgcgagtgtttc
cagcggctgatgagccagggctggaccgacgctatccgcgcctgcttccccgatgaacgt
atctataccttctgggattactttcgtaaccattggcagaccaactcggggctgcgcatt
gatcacctgctgctcaacgccgagaccagcgctcggctgcaattggcgggggtggaccac
tggcctcgtaatgagcctcatgccagtgatcatgcgccgacgtggattgagctggatatg
gcggggtga
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