Paucimonas lemoignei: NCTC10937_02429
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Entry
NCTC10937_02429 CDS
T05492
Symbol
oprD_6
Name
(GenBank) outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
plg
Paucimonas lemoignei
Pathway
plg01501
beta-Lactam resistance
plg02020
Two-component system
Module
plg_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_02429 (oprD_6)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC10937_02429 (oprD_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plg02000
]
NCTC10937_02429 (oprD_6)
01504 Antimicrobial resistance genes [BR:
plg01504
]
NCTC10937_02429 (oprD_6)
Transporters [BR:
plg02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC10937_02429 (oprD_6)
Antimicrobial resistance genes [BR:
plg01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
NCTC10937_02429 (oprD_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
SQF98304
LinkDB
All DBs
Position
1:complement(2710675..2711991)
Genome browser
AA seq
438 aa
AA seq
DB search
MRTRFTLMTALALLGAGKAMMANAQEQGFIEDSTLNLLARNFLLHNDYRSAHPDQSYRQE
WAQGFIANLQSGFTEGQLGIGIDAHAFYGLKLDGGRGHAGTGLLPLDSDGRAESEYSSAG
AALRLRYSKTTVKFGEMEVETPVFDTADKRLQPEYATGVFLDSQQIEGLRLVAGHFSAFK
NQNASTARGNFDGYGVSTRNASISLAGVEFSGDGALGGSVYTAQLSNTWQQYYANLHFKQ
ALSANSSLLLDSNLYRTLDEGDANAGSINNTAYSLAAKYRVGSQAFTLAYQKVDGDTPFD
FVGGDSIYLANSIKYADFNGAHEQSWQVRYDLDFHELGVPGLKFMTRYVTGSQIDGSHAP
QGGAYNPFEADIDRYQPIQGRGGRHWERDIDLKYTVQSGPAKDLSFNVSHVAHRANTAQA
GDDIDRLYLVIEYPLQLR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgcgatttaccttgatgactgccctggcactgctcggcgctggcaaagcgatg
atggccaatgcccaggagcagggcttcatcgaagactcgaccctgaacctgctggcccgc
aacttcctgctgcacaacgattaccgcagcgcccaccctgaccagagttaccggcaggag
tgggcccagggctttattgccaacctgcaatcgggtttcaccgagggtcagctcggcatt
ggcatcgatgcccatgccttttatgggctgaaactggacggcggccgcgggcatgcgggc
accgggctgttgccgctggacagcgacgggcgtgccgaaagcgagtactccagcgcgggt
gccgcgctcaggctcaggtactcgaagaccacggtcaagttcggcgaaatggaggtcgag
acaccagtgttcgataccgccgacaagcgcctgcaaccggagtacgccaccggggttttc
ctcgacagccaacaaatcgaagggttgcgcttggtcgccgggcatttcagtgccttcaag
aatcagaatgcgtccaccgcacgtgggaattttgatggttatggcgtaagcacccgcaat
gccagcatcagtctggcgggcgtggagttttccggagatggggcactgggcggctcggtc
tacaccgcacaactgagtaatacctggcagcagtactacgccaacctgcatttcaagcaa
gcactgtcagccaacagttctctgctgctggatagcaatctgtaccgaacccttgatgag
ggagatgccaatgccggatcgatcaataacacggcctacagcctcgcggccaagtacagg
gtcggcagccaggccttcaccctcgcctatcagaaagtcgacggtgacacgccgtttgat
tttgtcggcggcgattccatctacctggccaactccatcaaatacgccgacttcaacggt
gcccacgagcaatcctggcaagtgcgctatgacttggacttccatgaactgggtgtgccc
ggcctgaagttcatgacccgctatgtgaccggcagccagatcgacggcagccatgcgcca
cagggcggcgcttataacccgtttgaggctgacatcgaccgctatcagcccatccagggc
agagggggtcgtcactgggaacgggacatcgacctcaaatacacggtgcaatcagggccc
gcaaaagacctgtcgttcaacgtttcccatgtggctcatcgcgccaataccgcccaggca
ggcgatgatatcgaccggctgtacctagtgatcgaatacccgctgcaactgcgctga
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