Paucimonas lemoignei: NCTC10937_02486
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Entry
NCTC10937_02486 CDS
T05492
Symbol
xthA_2
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10937_02486 (xthA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_02486 (xthA_2)
Enzymes [BR:
plg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC10937_02486 (xthA_2)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC10937_02486 (xthA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
SQF98361
LinkDB
All DBs
Position
1:complement(2774563..2775375)
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPQAEIEALGYHVHFHGQK
GHYGVALLSRKMPLALHKGFDKDDEEAQKRFIWGTFADDNGLPVTIMNGYFPQGESRDHP
TKFPAKQRFYDDLQELLETRFSNDQPLIVMGDVNISPEDSDIGIGPDNAKRWLKTGKCSF
LPEEREWMARLKNWGLVDSFRHLYPEVVDQFSWFDYRSRGFEDQPKRGLRIDLIMASHGL
QPRIKAAGVDYDLRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtctcgttcaacatcaacggtctgcgtgcccgaccccatcagctggcggcg
ctgatcgaaaaacaccagccggacgttatcggcctgcaggaaaccaaggtctccgatgag
cagtttccccaggcagaaatcgaagcgctgggctaccacgtgcatttccacggtcagaaa
ggccattacggcgtggcactgctgtcacgcaaaatgccgctggccctgcacaaaggcttc
gacaaagatgatgaggaagcccagaagcgtttcatctggggcaccttcgccgacgacaac
ggcctgccagtgaccatcatgaacggctatttccctcagggtgaaagccgtgaccacccg
accaagttccctgccaagcagcgtttctacgatgatttgcaggaactgctggaaacccgt
ttcagcaatgaccagccgctgatcgtcatgggtgacgtgaatatttctccggaagacagt
gacatcggcatcggcccggacaacgccaagcgctggctgaaaaccggcaagtgcagcttc
ctgccggaagagcgcgagtggatggcccgcctgaagaattggggattggtggacagcttc
cgccatctgtatccagaggtggtcgatcaattcagctggttcgactaccgcagccgtggc
ttcgaggaccagcccaagcgcggcctgcgcatcgacttgatcatggcctcacacggcctg
cagccaaggatcaaggcggctggcgtggattatgacctgcgcggcatggagaagccttcc
gaccatgcgccgatctggcttgagctgagctga
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