Paucimonas lemoignei: NCTC10937_02895
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Entry
NCTC10937_02895 CDS
T05492
Symbol
fadK_1
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00061
Fatty acid biosynthesis
plg00071
Fatty acid degradation
plg01100
Metabolic pathways
plg01212
Fatty acid metabolism
plg02024
Quorum sensing
plg04146
Peroxisome
Module
plg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC10937_02895 (fadK_1)
00071 Fatty acid degradation
NCTC10937_02895 (fadK_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC10937_02895 (fadK_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC10937_02895 (fadK_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plg01004
]
NCTC10937_02895 (fadK_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plg04147
]
NCTC10937_02895 (fadK_1)
Enzymes [BR:
plg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC10937_02895 (fadK_1)
Lipid biosynthesis proteins [BR:
plg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC10937_02895 (fadK_1)
Exosome [BR:
plg04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC10937_02895 (fadK_1)
Exosomal proteins of breast cancer cells
NCTC10937_02895 (fadK_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
SQF98762
LinkDB
All DBs
Position
1:complement(3242901..3244484)
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AA seq
527 aa
AA seq
DB search
MSAASKNLGRVIDRQADRERVAFIGMHGEHDTCRSQRVGETMSLTHRLANKLAPTGLGAE
HSITYGELDDLADSIARALAARGYAQGERIALLAANSVEYLAVVLGIMRAGLVAVPVNYK
FPDATVHYVIADSGARLLFCDPYRLPAAPQGLEHLELSAEGLAAFAESGAFRAFEPQSDE
PALILYTSGSTGKPKGVVLSHAAHLWVVQTRLQATRLADETPLIAAPFYHMNALALAFLS
LASHTTTVLLPQFTAASYIDAIQRHRCTWLTAVPPMIAMMLSEKALLADADLSSVRVVRM
GSAPVSASLLEQIRRLLPGAKVINAYGTTEGGPVVFGPHPAGLVSPPLSLGCAHPKVQLR
LRDEAGELSDQGVLELRSPGLMSGYHNRPDLPLPFTADGYYITGDVFERDGDGFYTFVGR
RDDMFVSGGENIYPGEIEKLLERHPAVQQACVVPVEDAIKGQKPVAFVVLREGFHATEDQ
LKTFVLEHAAAYQHPRRVWFLDALPLATTNKIDRRALIDQALSGLTH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcttcgaaaaaccttggccgggtgatcgaccggcaggctgatcgtgaaagg
gtggcgtttattggcatgcatggtgaacacgatacctgtaggagccaacgtgttggcgag
acaatgagcctgacacaccgcctcgccaacaagttggctcctacagggttgggtgccgag
cactcgattacttacggcgaactcgacgacctggccgacagcattgcccgcgcgctggcg
gctcgcggctatgcccagggcgagcggattgcgctgttggccgccaactcggtggagtat
ctggcggtggtgctgggcatcatgcgcgccgggctggtggcagtgccggtcaattacaaa
ttccccgacgccacggtgcattacgtcatcgctgatagcggggcgcggctgctgttttgc
gacccgtaccgtctgccagccgcaccacaagggcttgaacacctggagttgagcgccgaa
gggcttgccgctttcgcagagtcaggcgccttcagggcattcgagcctcagtcggacgag
cccgcgctgatcctctacacctccggttccaccggcaaacccaagggcgtggtgctcagc
catgccgcgcatttatgggtggtgcagacccgcttgcaggccacacgtctggctgacgaa
acgccgttgattgccgcaccgttttatcacatgaacgcgttggcgctggcgttcctgagt
ctagcgtctcataccaccaccgtgctgttgccacagttcacggccgccagttacatcgat
gccatccagcgccatcgctgcacctggctcaccgcggtgccgccgatgattgccatgatg
ctcagtgaaaaggctttgttggccgacgctgatctgtcctcggtgagggtggtgcgcatg
ggttcggcaccggtcagcgccagtctgctggagcagattcgccggttgctgcccggcgcc
aaagtcatcaatgcctatggcaccaccgaaggtgggccggtggtgttcgggccgcatccg
gccgggttagtcagccctccgttgtctctgggttgcgcccacccaaaagtacaactgcgc
ttgcgcgatgaagccggtgagctgagcgatcaaggtgtgctggaactgcgcagccccggc
ctgatgagcggctatcacaatcgcccggacctgccgctgccgtttaccgccgacggttac
tacatcactggcgacgttttcgagcgcgacggcgacggcttttacaccttcgtcgggcgc
cgcgatgacatgttcgtcagcggcggggaaaacatttaccccggcgaaatcgaaaagctt
ctggagcggcatcccgccgtgcagcaagcctgcgtggtcccggttgaagacgccatcaaa
ggccagaaaccggtggcattcgtggtcctgcgcgaaggctttcacgccacggaggaccag
ctcaaaaccttcgtgctggaacacgccgctgcctatcagcacccgcgccgggtctggttt
ctcgatgcattaccccttgccacgaccaacaagatcgaccgtcgcgccctgatcgaccag
gcgctctctggattgacccactaa
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