Paucimonas lemoignei: NCTC10937_03409
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Entry
NCTC10937_03409 CDS
T05492
Symbol
pdhR_1
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plg03000
]
NCTC10937_03409 (pdhR_1)
Transcription factors [BR:
plg03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC10937_03409 (pdhR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
MarR_2
Fe_dep_repress
TrmB
HTH_IclR
GMT-wHTH
HTH_Crp_2
HTH_36
HTH_27
HTH_11
HTH_5
HTH_41
HHA
HTH_CodY
GerPC
HTH_28
MarR
HTH_29
Ribosomal_S25
TFIIE_alpha
HTH_23
HTH_20
EST1
Imm49
EAP30
PaaX
BLACT_WH
HTH_54
BURP
Motif
Other DBs
NCBI-ProteinID:
SQF99265
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Position
1:3776787..3777539
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AA seq
250 aa
AA seq
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MKRAPIDDSFKVNRNPITLREIVLDKLRSAIMNFQLLPGDRLVERDLCERLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDACDIYELRCVLEGMIVQLFTLRAKAKNIRALE
KALEENRKALTEGELQQVLESVQSFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRSASNEEMERIVEAIKSGDPLAAHQASVDHVRSAAKVALDYLKAKQDNGSKVRELFAP
VALKDPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcgcccatagacgacagcttcaaggtcaatcgcaaccccattaccctgcgc
gaaatcgtgctggataaactgcgcagcgccatcatgaattttcaactgttgcccggcgat
cggctggtggaacgggatctgtgcgaacgccttggcgtcagccgcacctcggtgcgcgaa
gcactgcgccatcttgagtccgaagggctggtggagttcgctgatgccaaagggccgcgt
gtggcgatcattacccttgaagatgcctgcgacatctacgagctgcgctgcgtgctggaa
gggatgatcgtgcagttgttcaccctgcgggccaaggccaagaatatccgcgccctggaa
aaagccctcgaagagaaccgcaaggcgctcactgaaggcgagctgcaacaggtgctggaa
tcggtacagagcttctacgatgtgctgctcgaaggttcaggcaaccacgtcgccgccact
cagctgcgccagttgcaggcgcgaatcagctacctgcgggccacctcggtctcccaggaa
aaccgtcgcagcgccagcaacgaagagatggagcgcatcgtcgaggccatcaagagcggc
gacccgctggcggcccatcaggcgtccgtggatcacgtgcgcagcgctgccaaagtcgcg
ctggattacctcaaggcgaaacaggacaacggcagcaaggtacgcgagctgttcgcccct
gtcgcactgaaagatccacgcataggccgctga
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