Paucimonas lemoignei: NCTC10937_03957
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Entry
NCTC10937_03957 CDS
T05492
Symbol
ppsD
Name
(GenBank) non-ribosomal siderophore peptide synthetase
Organism
plg
Paucimonas lemoignei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
Thioesterase
Abhydrolase_1
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
SQF99791
LinkDB
All DBs
Position
1:4389562..4396968
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AA seq
2468 aa
AA seq
DB search
MDRTVATRIARRFITLPLEKRRLYLQKMLEEGVSPANLPIPEVQSAYPRLPLSYAQERQW
FLWQMDPDSSAYHVPMMLRLKGVLDIAALQRSFDLLINRHQSLRTTFRLIDEQPAQVIAD
QQTLRLDIQPLDPDIVDREAAIQAFIGQSSGKLFDLEHGPLLRVELLRVDAEEHVLVMTQ
HHIVSDGASMQVMVNELVECYAAFSQGRQPELPALSIQYADYAIWQRHWMEAGERERQLA
YWTAQLGGEQTVLALPTDRPRPAEQSYRGAQFSVETDPRLGAALLQMAQQHNVTPFMLLL
ASFQTLLHRYSQQNDIRIGVPSANRNRPETERLMGFFVNTQVLKVQFNEHSRFSEVLQQV
RQAALEAQAHQDLPFEQLVSALQPERSLSHSPLFQVLFNHQGTLEGQSAHSLPQLSVDHL
PWNTPSAQFDLTLNTSLSEQAFSASISYAVDLFDTATIEQLSRHWLALLRAVVIDAEQPV
ASLPLLDATERSLMVEGWNSPVSQTPNALTVIHLFEQQVQRDPQAVALIVGEQQLTYQQL
NRRANQLAHALIQRGVGPEVLVGVALERSVDMIVALLGVLKAGGAYLPLDPGYPQDRLAY
MIDDSGIGLLLTQAAVQPQLPIPAGVEALILDAQTDGLAGYAETNPQGATSAEHLAYTIY
TSGSTGKPKGVMVAHGALVNFISSMARAPGLSADDRMLSLTTFCFDIFGLEIYLPLTVGA
RLVLAETGVNLDPAALLDIVARQGISALQATPSTWRMLLDHPQRNALQGCKLLCGGEALS
DELASRMLAISDQLWNLYGPTETTIWSAIHRLDPQHPKPWLGRAIDNTTFYILDADLQPA
PIGVAGELLIGGNGLARGYFQRPDLSAERFVPDPFGPPGARLYRTGDRCRYRRDGVIEYL
GRLDHQVKIRGFRIEPGEIESRLHAQPTIRAAAVVVKPGASGEQLVAYIVPVEPVEHGAE
QTALREQIRNSLRKDLPDYMVPAHLMFLEQLPLTPNGKLDRKALPSPDASQNQAIYVAPH
TELQQRIAHIWQDVLKLEKVGISANFFDLGGDSIISIQLVSRARQQGIDFSPKDLFQHQT
IEQLANVVRVDGGALAEQSAQDEQPFALSGLNAQQLNTLPVPLELIEDIYPLSPMQQGML
FYTLEANEAALYLNQMAVSVEGLNVERFLAAWNATIQRHEILRTGFWSASTLAEPLQLVY
KQASIAVRQLDWQGRSVGADELKQQVNADAAQGFDLLHAPLMRLTLIRLAEHSHYLIWTS
HHILMDGWSSSRLLGEVLEHYSGQPATPKQGRYRDYIGWLKAQSQQSLERFWKDQLREVN
GPTLLASAIAPRPDPSLTGHEPLYLRWDREQTAYLREQAQQLRVTPNTLIQAAWLLLLQR
YTGQQTVCFGATVAGRPSSLDNADEMLGLFINTLPVVQSPQPSQRVDDWLAQLQSCNLNL
RDHEHASLADIQRWSGNSGQALFDSIIVFENHPLDERLEHASRHGLRFGEVKAHGVTDFA
MDLAVMLNETLSVEFMVLRSQFTPEATEQIRRSYEALLLALLNNPQATLGSLDMLSVDEQ
RLLQASNRMTEPPQSAPLLAQVIEQHARQRPDAIAVSCAGVTLSYGELDSRATRLAQRLI
SQGIGPEHFVGVALERSVEVIVAFYAVMKTGAAYVPLDIDYPKERIEWIIGNSAMNVLLT
QDSLLERFAATEVTLIALDATSSTDPHLSCGTGFIREDMSEPDTHAASGMPSSRMNPVPQ
GSRLTAGFVANTPSPAIHPENLAYLIYTSGSTGQPKGVAVSHEQIRMHCQAIAQRYEMNT
DTRELLFMSFAFDGAQERWLSTLLSGGCLVVRDNRLWTPEETWNALHAERISIACFPPAY
LQQLAEFADSQTQPPPPVRIYCFGGDAVAEANFERVKRALRPQFLTNGYGPTETVVTPLL
WKVDAQAQCGAVYAPIGTRVGERTLYVLDEMLNPLPIGVAGELYIGGQGVGRGYHQRAAL
TAERFVADPFDAKGRRLYRTGDRVRQRADGVIDYLGRLDNQVKIRGFRIELGEIESRLRA
MAGVQDAVVVARETLNGKQLIGYVVARGNEGSDLRTALQSDLPDYMIPAQILVLNEFPLN
ANGKLDRKALPEPEFKGREFIAPRNGLERALAAIWQDVLQVEQIGVTDNFFELGGDSLRI
LKVLAKVRASENLNIELKLRDMISKPTIAELSGFAIQDLQNLDPLLLLNSRSIGKPPLFC
LHAGFGTVFDYEPVARCLEGQRSVYGLQCRMLLDRDWEDESLSAMAIDYAQYIRQKQPDG
PYHLLGWSLGGTLAVLVAQELENQGEPVEFLGLVDSFMPSPDQPDEQLDWSEDLRNFLAV
IFALPVEQLAPLTLSANHPVDELEALIDRIKTQLPAVSAYASIGSDELAHTFCVAMHLKR
LSLQIDVLPRTTSAAHCWWAANAIESFPRVDGSATNIRIPAGHYQMLSHPLLLTQLPHLL
RDVEALPQ
NT seq
7407 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcacggttgccaccagaatcgcacgccggttcatcaccctgcccctggaaaaa
cgcaggctgtacctgcagaaaatgctcgaagaaggcgtctcacccgccaacctgccgatc
ccggaagtgcaatcggcctacccgcgcttgccgctgtcttacgcgcaagagcgccagtgg
ttcctctggcagatggaccctgacagcagcgcctatcacgtgccgatgatgctgcgcctc
aagggcgtgctggatatcgcggcactgcaacgcagcttcgatctgttgatcaatcgccac
caaagcctgcgtaccacgtttcgcctgattgacgagcagcccgcgcaggtgatcgccgat
cagcaaaccctgcgcctggacatccagcctctggatcccgatatagtcgaccgcgaagcc
gccattcaagccttcatcggccagtcgagcggcaagttgttcgacctggagcacgggccg
ctgctgcgggtggaattgctgcgcgtcgacgccgaggagcatgtgctggtcatgacgcag
caccatatcgtctccgatggcgcgtcgatgcaggtcatggtcaacgagctggtcgagtgc
tacgcggcgttcagtcagggacggcagccggaactgcccgcgctgtcgattcagtacgcc
gattacgccatctggcagcggcactggatggaagccggtgagcgcgagcggcaactggcg
tactggacggcccaactgggcggcgagcaaaccgtactcgccctgcccactgaccgaccg
cgccccgccgagcaaagctatcgcggcgcgcagttcagcgtcgaaaccgacccacggctc
ggtgcggccttgctgcagatggcccagcaacacaacgtcacgcctttcatgttgttgctg
gcgtctttccagaccctgctgcaccgctacagccaacaaaatgacatccgcatcggcgtg
cccagcgccaaccgcaaccgcccggagaccgagcggctgatgggctttttcgtcaacacc
caggtgctcaaggtgcagttcaacgagcacagccgtttcagcgaagtgctgcaacaggtc
cggcaagcggcactggaggcccaggcccatcaggacttgcccttcgagcaactggtcagc
gccctgcaaccggaacgcagcctgagccacagcccgttgtttcaggtgctgttcaatcat
caggggaccctcgaaggccagagtgcgcactcgctcccgcaactgtcggtggatcatctg
ccctggaacacccccagcgcgcagtttgacctgaccctcaatacgtcgctgtcggaacaa
gctttttcggcgtccatcagttacgccgtcgatctgttcgatactgccactatcgagcaa
ctgtcccgccattggctggccttgctgcgcgccgtggtcatcgacgccgagcaaccggtc
gcgagcctgcctttgctggacgccaccgagcgcagcctgatggtcgagggctggaacagc
ccggtcagccagaccccgaacgcgctgaccgtgatccacctgttcgagcagcaggtgcag
cgcgatccgcaggcagtcgccctgatcgtcggcgaacagcaactgacgtatcagcagctc
aaccgccgcgccaaccagttggcccatgccctgatccaaagaggtgtcggcccggaagtg
ctggtcggtgtggcgctggagcgcagcgtggacatgatcgtcgccctgctgggcgtcctc
aaggcaggcggcgcttatctgccgctggatccgggttatccccaagaccgcctggcctac
atgatcgacgacagcggcattggtctgctgctgacccaggccgccgtgcagccgcaattg
ccgatcccggccggggttgaagccctgattctggatgcgcagaccgacgggctggcgggc
tacgccgagaccaatcctcaaggtgcgacgagcgccgagcatctggcctatacgatctac
acctccggctccaccggcaaacccaaaggcgtgatggtggcccatggtgcgttggtcaac
ttcatcagcagcatggcccgcgcgccggggctgagcgccgatgaccggatgctgtcgctg
accactttctgcttcgatatcttcggcctggaaatctacctgcccctgactgtcggtgcg
cggctggtactcgccgaaaccggcgtcaacctcgaccctgccgcgctactggatatcgtc
gcgcgccaaggcatcagtgcgctgcaagccacgccctcgacctggcgcatgctgctggac
catcctcagcgcaatgccctgcaaggctgcaaactgctgtgcggtggcgaagccttgagc
gatgaactggcctcacgcatgctcgccatcagcgatcagctgtggaacctgtatggcccg
accgaaaccaccatctggtcggcgatccatcgtctcgacccgcagcaccccaaaccctgg
ctcgggcgcgcaatcgacaacaccacgttttatatcctcgacgccgacctgcaacccgcc
ccgattggcgtagccggtgaactgcttatcggcggcaacggcctggcccgtggctatttc
cagcgcccggacctgagcgccgagcgcttcgtgcccgaccccttcggcccgcccggcgcc
cgcttgtatcgcaccggcgaccgttgccgttatcgccgcgacggggtgatcgaatacttg
gggcggcttgatcatcaggtgaagattcgcgggttccgcatcgaaccgggtgagatcgaa
agccgcctgcatgcccagccgacgatccgcgctgcagccgtagtcgtgaaacccggcgcc
agcggcgagcaactggtggcctatatcgtgccggttgaacccgtggaacacggcgctgag
caaacggctctgcgggagcagattcgcaacagcctgcgcaaggacctgccggactacatg
gtgcccgcgcacctgatgttccttgagcagctgcccctcacgcccaacggcaaactggac
cgcaaggccctgccctcgccggacgcaagccaaaaccaggcgatttacgtcgccccgcac
accgagttgcagcaacgcatcgcccacatctggcaggacgtgctcaagctggagaaggtc
ggcatcagcgccaacttcttcgatctgggcggcgattcgatcatctccattcaactggtc
agcagagcccggcaacagggcatcgacttttcccccaaggacctgttccagcatcagacc
atcgagcaactggccaatgtggttcgggttgacggcggcgcgttggcagaacaatccgct
caggatgaacaacccttcgcactctccggcttgaatgcccagcaactgaacacactgccg
gtgccactggaactgatcgaagacatttaccccctgtcgcccatgcagcaaggcatgttg
ttctacaccctggaggccaacgaagcggcgctgtatctgaaccagatggcggtctcggtt
gagggcttgaatgttgagcgttttctggcggcctggaacgcgacgatccagcgccacgag
attctacgcaccggcttctggtcggccagcaccctggccgagccgctgcaactggtctac
aaacaggcgtccattgccgtgcgacaactggactggcaaggccggtcggtaggcgccgac
gaactcaaacagcaggtaaacgctgacgccgcccaaggctttgacctgctgcacgcgccg
ctgatgcgcctgaccctgatccgcctcgccgagcacagccactacctgatctggaccagc
catcacatcctcatggacggctggagcagttcgcgattgctgggcgaagtgctggagcat
tacagcggccaacccgcaacgccgaaacagggccgctaccgagattacatcggctggctc
aaggctcagtcgcagcagagccttgagcggttctggaaggatcaactgcgcgaggtcaac
ggcccgacgctgctggccagcgccattgcgccgcgtcccgatccaagcctgaccgggcat
gagccgctgtacctgcgctgggaccgcgagcaaaccgcttacctgcgcgagcaggcccaa
caactgcgcgtcacccccaacacgctgatccaggccgcgtggttgctgctgttgcagcgc
tacaccgggcagcagacggtgtgtttcggcgcgactgtcgcaggccgtccttccagcctg
gataacgccgatgaaatgctcgggctgttcatcaataccttgcccgtggtgcaaagtccg
cagccgagtcagcgggtcgacgactggctggcgcaactgcaaagctgcaacctgaacctt
cgcgatcatgagcacgcttctctggctgacattcagcgctggtccggcaacagtggccag
gcgctgtttgacagcatcatcgtgttcgaaaaccacccgttggatgaacgcctggaacac
gcctcgcgccacggtctgcgcttcggcgaggtcaaggcccatggcgtgaccgactttgcc
atggacctggcggtgatgctcaacgagaccctgagcgtcgagttcatggtcctgcgcagt
caattcacccccgaggcgaccgaacagattcgccgcagctatgaggcgctgttgctggcg
ctgctgaacaatccccaggcgactctgggcagcctggacatgctcagcgttgacgaacag
cggttgctgcaagccagcaatcgcatgacagaacccccacaatccgctccgctgctggcg
caagtgatcgaacagcacgcccgccaacgacccgacgccattgccgtgagttgcgcaggc
gtcacgttgagctacggcgagctggacagccgcgccactcgcctggcccagcgtctgatc
agccaggggattggcccggaacacttcgtcggtgtggcgctggagcgttcggtcgaggtg
atcgtcgcgttctatgcggtaatgaaaaccggcgcagcctatgtgccgctggacatcgat
taccccaaggagcgaattgagtggatcatcggcaattcggccatgaatgtgctgctgact
caagacagtttgctagagaggtttgctgcgaccgaggtgactctgattgccctggatgcc
acatcttctacagatccacacttgtcctgtgggaccggattcatccgggaagacatgagt
gaacccgatacacatgctgcgtcaggaatgccctcttcccggatgaatccggtcccacag
ggatccaggttaaccgctggctttgtggcaaacacaccatcccccgcgatccaccccgaa
aacctcgcctacctgatctacacctcaggctccaccgggcaacccaagggcgtggcggtc
agtcacgaacagatccgcatgcactgccaggccatcgcccaacgctatgaaatgaacacc
gacacccgcgagctgctgttcatgtcgttcgcgttcgacggtgcccaggagcgctggctg
tcgaccctgctcagcggcggctgcctggtggtgcgcgacaatcgcctgtggacaccggaa
gaaacctggaatgcgttgcacgccgagcggatcagcatcgcctgtttcccgcccgcttac
ctgcaacaactggccgaattcgccgacagccagacccagccgccgccaccggtacgcatc
tattgcttcggcggggatgcggtcgccgaggccaacttcgaacgggtcaaacgcgccctg
cgcccgcaatttctcaccaatggctacggccccaccgaaaccgtggtcacgccgctgctc
tggaaagtcgacgcccaggcccaatgcggcgcagtgtatgcaccgattggcactcgggtc
ggcgagcgaaccctgtacgtgctggatgaaatgctcaacccgttgccgattggcgtggcc
ggtgagttgtacatcggcggtcagggcgtggggcgcggttatcaccaacgggcggcgctg
accgccgagcgatttgtcgccgacccgttcgacgccaagggccggcgcttgtatcgcacc
ggcgaccgggttcgtcagcgtgccgatggggtcatcgactacttgggcaggctcgacaac
caggtgaagattcgcggcttccgcattgaactgggggaaatcgaatcccgcttgcgagcc
atggccggcgtgcaggatgccgtggtggtggcccgggaaaccctcaacggcaagcagttg
attggttatgtggtggcccgtggcaacgaaggctcagacctacgtaccgcactccaaagc
gacctgccggattacatgatcccggcgcagatcctggtgctcaacgaattccccctcaac
gccaacggcaagctggaccgcaaagcgctgccggaacccgagttcaaaggccgggagttc
atcgctccacgcaatgggctggagcgggcactggcagccatctggcaagacgtgctgcaa
gtcgagcagatcggcgtcaccgataacttctttgaactgggcggcgactcgctgcggatc
ctcaaggtgctggcgaaagtccgggccagcgagaacctaaacatcgagctgaaattgcga
gacatgatcagcaagccgaccattgccgagctgtcggggtttgcgatccaggacctgcaa
aatctcgatccactgctgttgctcaatagccgcagcattggcaagccgccgctgttctgc
ctgcacgctgggtttggcacagtgtttgactacgagcctgtggcgcgctgccttgaaggc
cagcgcagcgtttatggcctgcaatgccgcatgcttctggaccgtgattgggaagatgaa
tcactgtcggcaatggccatcgattacgcgcagtacatacgccagaaacagccggacggg
ccgtatcacctgctgggctggtcactgggcggcacgctggcggtgctggtcgctcaggag
ctggaaaaccagggtgaaccggtggagtttctcgggctggtagacagcttcatgccgagc
cctgatcagcccgatgagcagctggactggagcgaggatctacgcaactttctggcggtg
atttttgccctcccggttgagcagcttgcgcccttgaccctgagtgccaaccaccctgtg
gatgaactggaagccttgatcgaccgaatcaagacccaactgcctgccgtttcggcctat
gccagcatcggcagcgatgagctggcgcacaccttctgcgtcgccatgcacctcaagcgc
ctgtcactgcaaatcgatgtgctgccgcgtacgaccagtgccgcccattgctggtgggcg
gccaatgccatcgaaagcttcccgcgggtcgatggttctgcaaccaacatccgcattcct
gcgggccattaccagatgctcagtcatccgctgttgctgactcaactgccgcacctgctg
cgcgatgttgaagcgctgcctcaatga
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integrated database retrieval system
