Paucimonas lemoignei: NCTC10937_03962
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Entry
NCTC10937_03962 CDS
T05492
Symbol
xlyA
Name
(GenBank) peptidoglycan-binding LysM
Organism
plg
Paucimonas lemoignei
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
DUF4384
Motif
Other DBs
NCBI-ProteinID:
SQF99796
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Position
1:complement(4402711..4405959)
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AA seq
1082 aa
AA seq
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MNTQTYTVQQDDTLSTLAQRFGSSVGQLQELNPFIHNPNYIRAGWTLNIPTPESAVSATA
SEPPVSEVLKLERIPDVAEHDTTNFCGAQACSESSHYYDILYEVGQDSFWLMREHTADVL
VKAADKLKKAVVTTDADSRIKALNERGLMEFFLEPKLSSFLDTQKSQKYHEIEQRLRELK
QEIKAFEAEGAVKNGLKIDNTPLLTAEQNREIIPRQKQFRELAPELRALETEARQQARKE
GYRFLGGELFSPEAIEMGKILELYIKQRQDLIDGKNPDFKQEEIDQFRKVHAKLQGDLAA
GVYSTNINLVEWVRESETLFRYSEFTKTLMRAAAYGIALPEFALHHPDEDISWGIKRYRE
YHELLKKKAALEKGIETDFDNWLRVGRQQPPSSLFESERLQWQQLENTEKALKQDAEDII
RARKPALHLLWEPETFTPKPEQRLVRSNFPLREISVPTERERLSHLSFKDLRNSLGRQAQ
KTLQEDLAKIAAKTGNPNFNINAGNLSDGDALDYWFIHMDAKRLKVQEGWFDTSGFFAPE
RFRAYLKAQGFYIENLRDDAEFEAWGNGLKQMLFKKSPLGPLRLIDNSPQARLIRCLTPP
QSNLHSGATAKGFQLSLNKGASTGVETFLDINLARGEVELVQFELPKRNQATSVKAKYLN
FRQQEAEVDLGRFCLEGGIKAWGFAGASMLLSANLALKPSDSKNDVELDTRRDAQRGITR
VDVHGLPNARADEVINANLNLFAGVQAGIKISGSLQWAPPKDLLTARSVQPYNELDPSKK
DWLTVASLGVNFSAAAGVGAKGDFSLSLQNGQIILRLKAALIAGVGADGEFNFVLGYKAM
VHFLDIFNRELIRNEYHKLDWIMPEAFEYFTKAQVLVAAGMELQWLFLLGYNKVNALYEA
MTAADRAGGMAYTIVKNKQDRELMKWVAMLTPEGLGSLLGTFLQLPKSFELTLGASAPAE
KYSAAQSRSFQRQAIEIILGAIVANAYDETFYKYGCIDTLALARRGFREAVERIEGHVAK
ASYTENVYKLDDFMLDGALSDSEFPRLASLMEEYKKHRAVLSPDVMWRAETPTFETIMNL
ID
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcaaacctataccgtccagcaggacgacaccctcagcacacttgcccagcgt
tttggcagcagcgtcggccaactgcaagaactgaatccctttatccacaaccccaactac
attcgtgctggctggacgctgaacattcctacaccagaaagcgccgtctctgcgactgcg
tctgagcctcccgtgagtgaagtgctcaaactggagcgaattccggacgttgcagaacac
gacactactaacttctgtggcgcgcaggcctgcagcgagagcagccactattacgacatt
ctttatgaagtagggcaggacagcttctggctgatgcgcgagcacacagcggacgtattg
gttaaagcagcagacaaactgaaaaaagccgtcgtcaccaccgatgccgattcacgtatc
aaggcgctgaatgagcgagggctgatggagtttttccttgagccgaagttaagcagtttt
ttggatacccagaagagccagaagtaccacgaaattgaacaaaggttgcgcgagctcaag
caggagataaaggcatttgaggccgagggtgctgtaaagaacggactgaaaatcgataac
accccgctactgaccgctgaacagaaccgcgaaattattccaaggcaaaagcaatttcga
gagctggcgccggagctacgcgcgctggaaacggaggcccggcaacaggcaaggaaagaa
gggtaccgttttctgggtggcgaattgttcagccctgaagctattgaaatgggcaagatt
cttgagctctatatcaagcagcggcaggatttgatcgacggcaagaaccccgatttcaaa
caagaggaaatcgaccaattccgtaaggttcacgcgaaactgcagggcgatctcgcggct
ggcgtatatagcacgaatatcaatctggtcgagtgggtcagagagtctgaaacgttgttc
cggtattcggagttcaccaaaacattgatgcgcgctgccgcttatggcattgccctgcct
gagttcgctttgcatcaccctgacgaggatatttcctggggcatcaagcgctaccgggag
taccacgagctgctaaagaaaaaagccgccttggaaaaagggattgaaactgacttcgac
aactggctgcgcgtgggacggcaacagccgccgagcagcttgttcgagagcgaaaggctc
cagtggcagcagctggaaaacacagaaaaggcgctcaaacaggatgctgaagacatcatc
cgcgcccgcaaacctgccttacacctgctttgggaaccggagactttcacgcctaaacct
gagcagcgcctggtgcgcagtaactttcctctgcgggaaatcagcgtaccgactgaacgc
gaacgtcttagccacctcagcttcaaggatctgcgtaatagcctgggcaggcaggcacaa
aagaccctccaggaggatctggccaagatcgctgccaaaacgggcaacccaaacttcaac
atcaatgctggcaacctcagtgatggcgatgcgctcgactattggttcatccatatggat
gccaagcgactcaaagttcaggaaggctggttcgacacttccggcttttttgccccagag
cgattcagggcttacctcaaggcacagggtttctatattgagaacctgcgtgacgacgcc
gaattcgaggcgtggggcaacggcctcaagcaaatgcttttcaagaaaagcccactgggc
cccctgcgcctcattgataacagcccgcaagcgcgtttgattcgttgcctcacaccgccg
caaagcaatttgcacagcggtgccactgcaaagggcttccaactcagtttgaataagggc
gccagtaccggcgtcgagacgtttctggacatcaacctcgctcgtggtgaagtcgaattg
gtccagttcgaactgcccaaacgcaaccaggccacctccgtcaaagcgaaatatctgaat
ttcaggcagcaggaagccgaagtcgaccttggccgcttctgcctggaaggcggcatcaaa
gcctgggggtttgccggcgcatccatgttgctgagcgccaatctggccctcaaacccagc
gatagcaaaaacgatgtggagctggacaccaggcgtgatgcccagcgtggcatcacccgt
gtcgatgtccacggcctgcccaatgcgcgcgcggacgaggtcatcaatgccaacttaaat
ctgttcgcaggtgtccaggctggcatcaagatcagcggcagcctgcaatgggcaccccca
aaagacctgctgaccgcccgcagcgtccagccctataacgaactggaccccagcaaaaaa
gactggcttaccgttgcgtcgctgggcgttaacttcagtgccgccgccggtgtgggtgcc
aaaggtgacttcagcctgtccctgcaaaacggccagatcatcctgcgtctcaaagccgcg
cttatcgccggagtcggcgctgacggcgaattcaacttcgtcctcggctacaaagccatg
gtgcacttcctcgatatattcaatcgggaattgatcaggaacgaataccacaaacttgat
tggatcatgccggaggcgtttgagtactttactaaggcgcaggtgctcgtggcggcgggc
atggagcttcagtggttgtttttgttggggtataacaaggtcaatgcgctatatgaggct
atgacggcggcggatcgggctgggggtatggcctatacgattgtgaagaataaacaagat
cgagaactgatgaaatgggtcgcgatgcttactccggaaggattgggatcattgttaggg
acatttttgcagttgccaaaaagttttgagctgactttaggggcatcggcacccgcggaa
aaatatagtgctgcccaatcgcgttcatttcagcggcaagcaatcgaaatcatattgggt
gccatcgtggcgaatgcttacgacgagacgttctacaagtacggttgtattgatacgctg
gctttggcgagacggggctttagagaggctgtggagcgtattgaagggcatgtagctaaa
gcgtcatacactgaaaatgtttataagctcgatgattttatgcttgatggtgccctctcg
gattccgagtttccacgtctagcatctctcatggaggaatataaaaaacacagggccgtt
cttagtccagatgtcatgtggcgtgcagagacgcccacgtttgaaactatcatgaattta
attgattga
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