Paucimonas lemoignei: NCTC10937_04437
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Entry
NCTC10937_04437 CDS
T05492
Symbol
fecI5
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_04437 (fecI5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_04437 (fecI5)
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10937_04437 (fecI5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
GerE
HetZ
HTH_24
Trp_repressor
DUF6031
HTH_36
DUF2774
Motif
Other DBs
NCBI-ProteinID:
SQG00262
LinkDB
All DBs
Position
1:4951121..4951630
Genome browser
AA seq
169 aa
AA seq
DB search
MGTRNSFEQDVEVLYLQHHSWLKGWLQRRLGQAADADDLAQDTFVRIIRSRSPINELKQP
LAYLATIANSLLVNRWRRLAVERAYAEALATQPEHFELSPEERYLLIETLTEIDELLHGL
SPRVREIFLLSQLDGLTYKQIATQLGLSVNQVQKSMLKAFSRCYASLFE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcgcaattcgttcgaacaggatgtcgaagtcctttatctgcagcatcacagc
tggctcaagggatggctgcagcgccgtttgggtcaggcagcggatgcggatgatctggct
caggacacctttgtgcggatcatccgctcgcgcagcccgatcaatgaactcaagcaaccg
ctggcgtacctggcgaccatcgccaacagcttgctggtcaatcgctggcggcggctggcc
gtggagcgagcctatgccgaagcgctggccacccagccggagcacttcgagctgtctccg
gaagaacgctacctgctgatcgaaaccctgaccgaaatcgatgaactgctgcacggtctg
tccccacgcgtccgggagattttcctgctctcgcaactcgatggcctgacctacaaacag
atcgccacgcaactcgggctaagcgtgaatcaggtgcagaagtccatgctcaaggcgttc
agccgctgctacgccagcctgttcgagtga
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