Paucimonas lemoignei: NCTC10937_04497
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Entry
NCTC10937_04497 CDS
T05492
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10937_04497 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plg03019
]
NCTC10937_04497 (pcnB)
Enzymes [BR:
plg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC10937_04497 (pcnB)
Messenger RNA biogenesis [BR:
plg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC10937_04497 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Pus10_THUMP_arc
Motif
Other DBs
NCBI-ProteinID:
SQG00315
LinkDB
All DBs
Position
1:5015664..5017064
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AA seq
466 aa
AA seq
DB search
MLKKLFQSFRTPLRKPQQHIRSTPEVLNSSQHSLQRGQFSRYAVNIVERLQNAGYQAYLV
GGCVRDLMLNIEPKDFDVATSATPEQVRNEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPVDDEDEDSNQSSRNESGRILRDNVYGTLEDDAQRRDFTINALYYDPVSERILDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLDFGIEKHSATPIRPLAPMLRDIPS
ARLFEEVLKLFLSGYAAPTFEMLVDLELFDPLFPASSKALEYNPTYTHTLISEALTNTDL
RIKQNKPVTPAFLFAALLWPALPAKALRLQERGMPPIAAMQEAAHELIVEQCQRIAIPKR
FTMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEETDGLGEWWTDYQ
DCNDSERRAMITDLGSKPDGAPRKRRRSSGTKRKRAGGESPAASGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgtactccactgcgcaagccgcagcaacatatc
cgcagcacgcctgaagtgctcaacagcagccaacactcgctgcagcgtggccagttcagc
cgatatgcggtgaacatcgtcgagcgcctgcaaaatgcgggctatcaggcctatctcgtc
ggcggctgcgtccgcgacttgatgctcaatatcgaacccaaggatttcgacgtcgccacc
agcgccacgccggagcaggttcgcaacgaatttcgcaacgcgcggatcatcggccgacgc
ttcaagctggtccatatccacttcggtcgcgaaatcatcgaagtagcgaccttccgcgcc
aaccatcctgtggatgatgaggacgaagacagcaaccagtcttcgcgcaatgagagcggc
cggatcctgcgcgacaacgtctacggcacccttgaagacgatgcccagcgccgcgacttc
acgatcaacgccctctattacgatccggtcagcgaacgcatcctcgactacgccaacggc
gtgcacgacattcgcaatcgcctgatccgcctgattggtgatccagagcagcgttacaag
gaagacccggtacgcatgctgcgtgcggtgcgttttgccgccaagctggacttcggcatc
gaaaaacacagcgccacgccgatccgcccactggcaccgatgctgcgcgatattccttca
gcccgactgttcgaagaagtgctcaagctgttcctctctggttacgcggctccaaccttc
gagatgcttgttgacctggaactctttgatccactgttcccggccagttccaaggcgctg
gaatacaacccgacttacacgcatacgctgatcagcgaagcgctgaccaacaccgacctg
cgcatcaagcagaacaagccggtgaccccagccttcctgttcgccgccctgctctggcct
gcactgcccgccaaggcactgcgcttgcaggaacgcggcatgccgccgattgccgccatg
caggaagctgcccatgagttgatcgtcgagcagtgccagcgcatcgcgattccgaaacgc
ttcaccatgccgattcgcgagatctgggacatgcaggaacgtctgccgcgccgctctggc
aagcgtgccgacctgctgctcgacaaccctcgcttccgtgctggctacgatttcctgttg
ctgcgtgaaagcgctggcgaagagaccgatggcctgggcgaatggtggactgactaccag
gattgcaacgacagcgaacgtcgcgcgatgatcaccgacctgggcagcaagcccgacggc
gcacctcgcaagcgtcgccgcagcagcggcaccaagcgcaaacgcgccggtggcgaatcg
cctgcagcctccggcgagtaa
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