Paucimonas lemoignei: NCTC10937_04511
Help
Entry
NCTC10937_04511 CDS
T05492
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plg03016
]
NCTC10937_04511 (truB)
Enzymes [BR:
plg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10937_04511 (truB)
Transfer RNA biogenesis [BR:
plg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10937_04511 (truB)
Prokaryotic type
NCTC10937_04511 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
SQG00329
LinkDB
All DBs
Position
1:complement(5034296..5035213)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGRTTTTGDAEGEVLQTRPVTVGRADIEAALPHFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLECDADTARLSVDCTKGTYI
RTLVEDIGEKLGCGAYVAQLRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQHWPLLQFSEHSSFYWLHGQPVRAPDAPQFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgcatacgccgcaacgtcagcgggatcattctgctcgacaagccg
ctgggcttcacgtccaacgccgccttgcaaaaggtgcgttggttgctcaacgcagagaag
gccgggcataccggtagccttgatccactggccagtggcgtactgccgctgtgctttggt
gaggcgaccaaattctcgcagtacctgctcgattccgataagtcctacgagaccctggcg
cagcttggcaggaccaccaccaccggcgacgccgaaggtgaagttttgcagacccgcccg
gtgaccgttggtcgtgccgatatcgaggcagctctcccgcattttcgtggggaaatcagt
cagatacctccgatgtactcggcgctcaaacgtgatggccagccactctacaagttggcc
agggccggtgaagtggtggagcgcgagcctcgttctgttactattgcgcgcctggaattg
ctcgagtgtgacgccgataccgcgcgcctctcggtcgattgcaccaaaggtacatatata
cgtaccctggttgaggatatcggtgagaaactgggctgcggagcttatgttgcccagttg
cgccggactcaggcaggtcctttcagcctggcccagacggtcacgcttgaagagctggaa
gcggtacacgccgaaggaggtaatgaggcagtcgatcgattcctgatgccttcggacagc
ggcttgcagcactggccactgctacagttttcggaacacagttcgttttactggttgcat
ggtcaacccgtaagagcaccggacgcgccgcagttcggcatggttcgggtgcaggatcac
aacggtcgcttcattggtatcggtgaagtaagcgaagacgggcggatcgcgccgcgtcgc
ttgattcggtcagaatga
DBGET
integrated database retrieval system
