Paucimonas lemoignei: NCTC10937_04844
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Entry
NCTC10937_04844 CDS
T05492
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plg
Paucimonas lemoignei
Pathway
plg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10937_04844 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_04844 (rpoA)
03400 DNA repair and recombination proteins [BR:
plg03400
]
NCTC10937_04844 (rpoA)
Enzymes [BR:
plg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10937_04844 (rpoA)
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10937_04844 (rpoA)
DNA repair and recombination proteins [BR:
plg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10937_04844 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
SQG00649
LinkDB
All DBs
Position
1:complement(5449560..5450561)
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AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgccatattgatgtgcaggttgtcagt
ccaacccgcgccaaaatcactctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcccggctgtgcagtagtcgaggccgag
attgacggtgtactccatgagtacagcgccatcgaaggtgtacaggaagatgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgagacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgctaacctggcgtctaacggcgccctgaac
atgaagctcaccgtagctcgtggtcgtggttatgagccggcagactcgcgtcagagcgat
gaagatgaaagccgcagcattggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgagcagcgtactaacctggacaagctg
gttattgatctggaaaccaacggtactctggatcctgaagaggctattcgccgcgctgca
accattctgcaacagcagttggctgcgttcgtcgacctcaaaggtgacagcgaaccagtg
gtaatcgaacaggaagacgagatcgatccgatcctgctccgtccggttgacgatttggaa
ctgactgtacgttcggccaactgcctcaaggcggagaacatttactacatcggcgacctg
attcagcgcaccgaagtagaactgttgaagactccaaaccttggcaagaagtctttgact
gagatcaaagacgtcctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgccggcaagtcttaagaaggacgacaaggcgactgcctga
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