Paucimonas lemoignei: NCTC10937_04914
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Entry
NCTC10937_04914 CDS
T05492
Symbol
rfbB
Name
(GenBank) DTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00521
Streptomycin biosynthesis
plg00523
Polyketide sugar unit biosynthesis
plg00525
Acarbose and validamycin biosynthesis
plg00541
Biosynthesis of various nucleotide sugars
plg01100
Metabolic pathways
plg01110
Biosynthesis of secondary metabolites
plg01250
Biosynthesis of nucleotide sugars
Module
plg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC10937_04914 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC10937_04914 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NCTC10937_04914 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC10937_04914 (rfbB)
00525 Acarbose and validamycin biosynthesis
NCTC10937_04914 (rfbB)
Enzymes [BR:
plg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NCTC10937_04914 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
SQG00706
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All DBs
Position
1:5504437..5505507
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AA seq
356 aa
AA seq
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MTILVTGGAGFIGANFILDWLASSDESVINLDKLTYAGNLMSLEPVANDARYTFVDGDIA
DNLLVRQLLAEYRPRAVLNFAAESHVDRSIHSPQAFIETNVVGTFQLLESVREYWQSLPP
HAQGQFRLLHVSTDEVYGTLAKYDPAFTEDHPYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPLHFPEKLIPLIIVKALEGEDLPVYGDGQQVRDWLYVTDHCSAIRTVLG
AGVPGQTYNIGGWNEKTNLEIVHSVCALLDELSPRADGQPYLSQIKHVADRPGHDRRYAI
DASKIERELGWMPAETFETGIRKTVGWYLNSTDWVSSARSGAYREWVTTHYAGHSR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacaattttagtgaccggcggtgccggattcattggtgccaacttcattctggattgg
ctggccagctcagacgaatcagtcatcaacctagacaagctgacctacgcaggcaacctg
atgagtctggaacccgtggctaatgacgcccggtacacattcgtggatggcgatatcgcc
gataacctactggttcggcaattactggccgagtatcgccccagagcggtcttgaacttc
gcggcggagtctcacgttgatcgatcgattcatagcccgcaggcgtttatcgagaccaac
gtcgtgggtacgtttcaattgcttgaatcggtacgcgagtactggcagtcactgccccca
cacgcgcaaggtcagttccgcctgctgcatgtttcgaccgatgaagtgtatggaacactg
gcgaagtatgaccctgcctttaccgaagaccatccatacgagcctaacagcccttattca
gccagcaaggcggcgagcgaccacctcgtgcgtgcctaccatcacacctacggcctgccg
gtactgaccaccaactgctcgaacaactacggtccgctgcattttccggaaaaactgatt
cccctgatcatcgtcaaggcacttgagggcgaagatctgccggtgtacggggatggccag
caggtccgggactggctctacgtgaccgaccactgtagcgcgatccgcacagtgcttggg
gctggcgttcccgggcagacctacaacatcggcggatggaacgagaaaaccaacctggaa
atcgttcatagcgtctgcgccttgcttgacgaactctctccgcgcgctgatgggcagcct
tacctatcgcagatcaaacatgtggcggacaggccggggcatgaccgtcgttacgccatc
gacgccagcaaaatcgagcgcgaactgggctggatgcctgccgagacattcgaaaccgga
attcgcaagaccgtgggttggtacctgaatagcaccgactgggtcagcagcgcccgctca
ggggcgtaccgcgagtgggtgaccacgcactatgcgggtcactcccgatga
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