KEGG   Paucimonas lemoignei: NCTC10937_05253
Entry
NCTC10937_05253   CDS       T05492                                 
Symbol
lpd3
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
plg  Paucimonas lemoignei
Pathway
plg00010  Glycolysis / Gluconeogenesis
plg00020  Citrate cycle (TCA cycle)
plg00260  Glycine, serine and threonine metabolism
plg00280  Valine, leucine and isoleucine degradation
plg00310  Lysine degradation
plg00380  Tryptophan metabolism
plg00620  Pyruvate metabolism
plg00630  Glyoxylate and dicarboxylate metabolism
plg00640  Propanoate metabolism
plg00670  One carbon pool by folate
plg00785  Lipoic acid metabolism
plg01100  Metabolic pathways
plg01110  Biosynthesis of secondary metabolites
plg01120  Microbial metabolism in diverse environments
plg01200  Carbon metabolism
plg01210  2-Oxocarboxylic acid metabolism
plg01240  Biosynthesis of cofactors
Module
plg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
plg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
plg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
plg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:plg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NCTC10937_05253 (lpd3)
   00020 Citrate cycle (TCA cycle)
    NCTC10937_05253 (lpd3)
   00620 Pyruvate metabolism
    NCTC10937_05253 (lpd3)
   00630 Glyoxylate and dicarboxylate metabolism
    NCTC10937_05253 (lpd3)
   00640 Propanoate metabolism
    NCTC10937_05253 (lpd3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NCTC10937_05253 (lpd3)
   00280 Valine, leucine and isoleucine degradation
    NCTC10937_05253 (lpd3)
   00310 Lysine degradation
    NCTC10937_05253 (lpd3)
   00380 Tryptophan metabolism
    NCTC10937_05253 (lpd3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NCTC10937_05253 (lpd3)
   00670 One carbon pool by folate
    NCTC10937_05253 (lpd3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plg04147]
    NCTC10937_05253 (lpd3)
Enzymes [BR:plg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NCTC10937_05253 (lpd3)
Exosome [BR:plg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NCTC10937_05253 (lpd3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like GIDA AlaDh_PNT_C FAD_binding_2 NAD_binding_8 Pyr_redox_3 DAO Thi4 FAD_binding_3 Lys_Orn_oxgnase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: SQG01032
LinkDB
Position
1:5883403..5884803
AA seq 466 aa
MSSYDVVIIGGGPGGYNAAIRAGQLGLSVACIEGRETLGGTCLNVGCIPSKALLHASELY
ESAVGEEFAKLGIEVTPTLNLGQMMKQKGESVTALTKGIEFLFRKYKAEWIKGWGRIAGP
GRVIVTDAQGVETELQAKDIIIATGSEPTPLPGVDIDNKRILDSTGALSLPEVPKHLVVI
GAGVIGLELGSVWRRLGAKVTVVEYLDHVAHGTDLETGKTLQRSLSRQGINFKLSSKVTT
ATSSDLGVSLSVEPAAGGEAELIEADYVLVSIGRRPYTKGLGLETVGLEVDKRGMLENKG
HRTAAEHVWVIGDVTSGPMLAHKAEDEANVCLERIVGKAGEVNYNLIPNVIYTRPELASV
GKTEEQLKAEGRAYKVGKFPFSANSRAKVNHEADGFAKVLADERTDEILGVHLVGPSVSE
MIAEFCVAMEFAASSEDIGLISHPHPTRSEALRQAAMSVMGLPTQT
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagcagttatgacgttgtgattatcggcggcggccccggcggctataacgcggccatc
cgtgccgggcagttggggctgagcgtggcctgtatcgaaggtcgggaaaccttgggcggc
acctgcctgaacgtgggctgcatcccctccaaggcgctgctgcacgcctccgaactctac
gaatcggcggtgggtgaagagttcgccaagctcggtattgaagtcacgcccacgttgaac
cttgggcagatgatgaagcagaaaggcgaaagcgtgactgccctgaccaaaggcatcgag
tttctgtttcgcaagtacaaagccgagtggatcaagggctgggggcgtatcgcggggcct
ggccgggtcatcgtcaccgatgctcaaggcgttgaaaccgagctgcaagccaaggacatc
atcatcgccaccggttccgagccgactccactgcccggcgtagatatcgacaacaaacgc
attctggactccaccggcgcgctgtctttgcctgaagtgcccaagcatctggtggtgatc
ggcgcgggcgtcatcggcctggagctgggttcggtatggcggcgtctgggggcgaaagtc
acggtggtggaataccttgatcacgtcgcccacggcactgatctggagactggcaagacc
ttgcagcgctcattgtcgcgtcaaggcatcaacttcaagctgagctcgaaagtcaccacg
gccacctcatcggacctgggtgtaagcctgagcgtagaacccgctgccggtggtgaagcc
gaactgattgaagctgattacgtattggtttctatcggccgtcgcccttacaccaagggc
cttggcctggaaaccgtgggccttgaggtggacaagcgcggcatgctggaaaacaaaggc
caccgcaccgcggcagagcatgtctgggtgattggcgatgtcacctccgggccgatgctg
gcgcacaaggccgaagacgaggccaatgtgtgcctggagcgcatcgtcggcaaagccgga
gaagtgaattacaacctgatccccaacgtgatctacacccgcccggaactggccagcgtg
ggcaagaccgaggagcagctcaaggccgaaggccgcgcgtacaaggtcgggaaattcccg
ttcagcgccaacagccgcgccaaggtcaaccacgaggccgacggcttcgccaaggtgctg
gctgacgagcgcaccgatgagatccttggcgtacacctggtggggccaagtgtcagtgaa
atgattgccgagttctgcgtggccatggagtttgcggcgtcgtccgaggacatcggcctg
atcagccacccccacccgacccgctccgaagccctgcgccaggcggcgatgagcgtgatg
gggttaccgactcagacgtga

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