Paucimonas lemoignei: NCTC10937_05283
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Entry
NCTC10937_05283 CDS
T05492
Symbol
fecI_10
Name
(GenBank) putative iron-related RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_05283 (fecI_10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_05283 (fecI_10)
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10937_05283 (fecI_10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
HTH_23
HTH_11
HTH_24
DegS
HTH_20
HTH_Tnp_4
DUF722
HTH_7
Trp_repressor
TnsD
DUF2774
Motif
Other DBs
NCBI-ProteinID:
SQG01062
LinkDB
All DBs
Position
1:5915383..5915892
Genome browser
AA seq
169 aa
AA seq
DB search
MPPHSHTAAVQRIYEQHHSWLHGWLKHRLSNACDAADVAHDTFVRILGAANATQIREPRD
YLATVARGLVIDRYRRRAIERAYEQAMAARLQDTVISEEDKALIIETLWAVDKALDDLGP
RTKGIFMMSQVEGLTYQQIAQQLKVSLTTVKKHMIRAFTECSMLMAHRS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcactcccatacggccgcagtccagcgcatctatgagcagcatcattcctgg
ctacatggctggctcaaacatcgcctgtccaatgcctgcgatgcagccgatgttgcacat
gacacctttgttcggattctcggcgctgccaacgcgacgcagattcgcgagcctcgcgac
tatctggccactgttgccagagggctagtcatcgatcgctatcggcgccgcgcaatcgag
cgggcctacgagcaggccatggctgcgaggctgcaggacacggtgatcagcgaagaagac
aaggccctgatcatcgaaaccctatgggctgtggataaggcgctggatgatctcggacct
cgcaccaagggaatcttcatgatgtcgcaggtagagggcctgacttatcaacagatcgcc
cagcagctgaaggtctcactgaccactgtgaagaaacatatgatcagagccttcactgaa
tgctcgatgcttatggcgcaccggtcttga
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