Planctomyces sp. SH-PL62: VT85_00015
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Entry
VT85_00015 CDS
T04401
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00220
Arginine biosynthesis
plh00240
Pyrimidine metabolism
plh00250
Alanine, aspartate and glutamate metabolism
plh01100
Metabolic pathways
plh01110
Biosynthesis of secondary metabolites
plh01240
Biosynthesis of cofactors
Module
plh_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VT85_00015 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VT85_00015 (carB)
00220 Arginine biosynthesis
VT85_00015 (carB)
Enzymes [BR:
plh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VT85_00015 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AMV35793
UniProt:
A0A142Y991
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Position
complement(3467..6703)
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AA seq
1078 aa
AA seq
DB search
MPKRTDIKKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPEM
ADRTYIEPVIPEIVERIIAVERPDAVLPTLGGQTGLNVGMALYESGVLAKYGCILIGASA
EAIRKAEDRNLFKKCMDEIGLESARSGLAESLEDARRIRDEVVGLPCVLRPSFTLGGSGG
GIAYNREEFDRMVNYALEISPTHSCLIEESLIGWKEYEMEVMRDCADNAVIVCSIENLDP
MGVHTGDSVTVAPAQTLTDKEYQRMRDASLAVLRKIGVDTGGSNVQFAVNPRDGRMIVIE
MNPRVSRSSALASKATGFPIAKIAAKLAVGFRLDEIRNDITRETPACFEPTIDYVVTKVP
RWAFEKFPEADAVLTTQMKSVGEVMAIGRTFKESLQKALRGLEVGRFGIGCDPKDRWGTP
DQPSEDEIIAKLATPNIERLWYLRYALLAGMGVERVHKLTGVDPWFLANIQELCEIEGRL
RQVRSLEEASDELIREAKRTGFADRQLAHLWGASENEVRRERRRRGIAAVYKLVDTCAAE
FEAVTPYYYSTYETEDEARVGDRPRIMILGGGPNRIGQGIEFDYCCCQAAFALRADGYEV
VMVNSNPETVSTDYDTSDRLFFEPLTVEDVLDICERVQPTGVIVQFGGQTPLNLAKALEA
AGVPIIGTSPENIDVAEDRERFRMVIERLGLRQPPNASATRFDQARRIADRIGYPVVVRP
SFVLGGRAMEIVYDETSLDRYMTEAVDASPDRPILIDKFLEDAVEVDVDAVSDGERTIVG
GVMQHIEEAGIHSGDSACAIPPYSLPDEIVARLKQQTYALAEALGVRGLMNIQFAVKDGE
IYVLEVNPRASRTVPFVSKATGLNLAQVAARVMVGKTLAELGVADEPSPSYTSVKEAVFP
FAKFPGVDIVLGPEMRSTGEVMGIAPDFPTAFAKSQLGASSRLPSEGTVFVSVASRDRKG
IVPIAKKLAELGFKIMSTAGTSAALAEEGLQVDVVRKIQEGRPNLLDYLANGDIALIVNT
PSGKGARTDEGRIRASAVSHGVPCITTLAGARAAVAAMERLREGPFEVYALQDLLKKS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagcgtaccgacatcaaaaagatcctgatcctcggcgcggggccgatcgtcatc
ggccaggcctgcgagttcgactattcgggcacccaggcgtgcaaggcccttcgcgaggag
gggtacgaggtcgtcctggtcaactcgaacccggccacgatcatgaccgaccccgagatg
gcggatcggacgtacatcgagccggtgatcccggagatcgtcgagcggatcatcgccgtg
gagcggcccgacgccgtcctgcccacgctcggcggccagaccgggctgaacgtcggcatg
gccctgtacgagtcgggcgtgctggcgaagtacggctgcatcctcatcggcgcgagcgcc
gaggccatccgcaaggccgaggaccgcaacctgttcaagaagtgcatggacgagatcggc
ctggagagcgccaggagcggcctggccgagagcctggaagacgcccgccggatccgcgac
gaggtggtgggcctgccttgcgtgctccgccccagcttcaccctggggggctcgggcggc
ggcatcgcctataaccgcgaagagttcgaccgcatggtcaactacgcgctggagatcagc
cccacgcactcctgcctgatcgaggaaagcctcatcgggtggaaggagtacgagatggag
gtgatgcgggactgcgccgacaacgccgtcatcgtctgctccatcgagaacctcgacccg
atgggggtccacaccggcgacagcgtgaccgtcgccccggcgcagacgctcacggacaag
gaataccagcggatgcgggacgcgtcgctggccgtcctccgcaagatcggcgtggacacc
gggggctcgaacgtgcagttcgccgtcaacccccgcgacggccggatgatcgtcatcgag
atgaacccccgcgtcagccgctcgagcgcgctggcgagcaaggcgaccggcttcccgatc
gccaagatcgccgccaagctggccgtcggcttccggctcgacgagatccgcaacgacatc
acccgcgagacccccgcctgcttcgagccgacgatcgactacgtcgtcaccaaggtcccg
cgctgggcgttcgagaagttccccgaggccgacgccgtcctgacgacccagatgaagtcg
gtcggcgaggtgatggcgatcggccggacgttcaaggagtcgctccagaaggcgctccgc
ggcctggaagtcggccggttcggcatcggctgcgacccgaaggaccgctggggcacgccg
gatcagccttccgaggacgagatcatcgccaagctggccacgccgaacatcgagcggctg
tggtacctgcggtacgccctgctggccgggatgggcgtcgagcgcgtccacaagctgacc
ggcgtcgacccctggttcctggccaacatccaggagctgtgcgagatcgagggtcggctc
cgccaggtccgatcgctggaggaggcgtccgacgaactgatccgcgaggccaagcggacc
gggttcgccgaccgccagctcgcccacctctggggcgcgagcgagaacgaggtccgccgc
gagcgccgtcgccgggggatcgccgcggtctacaagctggtggacacctgcgccgccgag
ttcgaggccgtcacgccgtattactattcgacctatgagaccgaggacgaggcccgggtg
ggcgaccggccccggatcatgatcctggggggcgggccgaaccggatcggccaggggatc
gagttcgactactgctgctgccaggcggcgttcgccctgcgggccgacggctacgaggtc
gtcatggtcaactccaaccccgagaccgtcagcaccgactacgacacgtcggatcggctc
ttcttcgagcccctgaccgtcgaggacgtgctggacatctgcgagcgcgtgcagcccacg
ggggtcatcgtccagttcggcggccagaccccgctgaacctggcgaaggcgctggaggcc
gccggcgtgccgatcatcggcaccagcccggagaacatcgacgtcgccgaggaccgcgag
cggttccgcatggtcatcgagcggctgggcctgcggcagccccccaacgcctcggccacg
cggttcgaccaggcgcggcggatcgccgaccggatcggctaccccgtcgtcgtccgcccc
agcttcgtgctggggggccgggcgatggagatcgtctacgacgagacgagcctggaccgc
tacatgaccgaggccgtggacgccagcccggaccggccgatcctgatcgacaagttcctg
gaagacgccgtcgaggtcgacgtcgacgccgtctccgacggcgagcggacgatcgtcggc
ggcgtgatgcagcacatcgaagaggccgggatccactccggcgacagcgcctgcgccatc
ccgccgtactcgctccccgacgagatcgtcgctcgcctcaagcagcagacctacgccctg
gccgaagccctgggcgtgcgcggactcatgaacatccagttcgcggtcaaggacggcgag
atctacgtcctggaggtcaacccccgggcctcgcggacggtcccgttcgtctccaaggcg
accggcctgaacctggcgcaggtcgccgcgcgggtgatggtgggcaagacgctggccgag
ctgggcgtggccgacgagccgtcgccgtcgtacacctcggtgaaggaggcggtcttcccg
ttcgccaagttcccgggcgtcgacatcgtgctcggccccgagatgcggtcgacgggcgag
gtgatgggcatcgcgccggacttccccaccgccttcgccaagagccagctcggcgccagc
agccggctcccctccgaggggaccgtcttcgtcagcgtcgcgtcccgcgaccgcaagggg
atcgtgccgatcgccaagaagctggccgagctgggcttcaagatcatgagcacggccggc
accagcgccgcgctcgccgaggaggggctccaggtcgacgtcgtccgcaagatccaggag
ggccggccgaacctgctggactacctggccaacggcgacatcgccctgatcgtcaacacc
cccagcggcaagggcgcccgcaccgacgagggccgcatccgcgccagcgccgtcagccac
ggcgtcccctgcatcaccaccctcgccggcgcccgcgccgccgtcgccgccatggaacgc
ctccgcgaaggccccttcgaggtctacgccctgcaagacctgctcaagaaaagctga
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