Planctomyces sp. SH-PL62: VT85_00325
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Entry
VT85_00325 CDS
T04401
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02024
Quorum sensing
plh03060
Protein export
plh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VT85_00325
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VT85_00325
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VT85_00325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plh02044
]
VT85_00325
Secretion system [BR:
plh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VT85_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
FGGY_C_2
DUF4854
ACR_tran
SAM_LFY
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
AMV35855
LinkDB
All DBs
Position
complement(81297..84359)
Genome browser
AA seq
1020 aa
AA seq
DB search
MKNLVNWKSILIVGSTLLGLIAMSPPEKKLKLGIDLSGGTILVYEVAKESTSSGNFNMEE
LIAALKQRADPQGVKETPIRNIGNNRIEIILPKASPEEVEEIKKMLTDVGSLEFRILANQ
KHDSEAIARAMGPGGLAKPPARYKWARLGEVSTGTEPQFTEASITDPQQNWKRDLYAGVE
VVLTGKDATGADKTLAIPILRNTNDTLTLAEPHNLGSIASYRVEYNPSGIRGGDPTNPRP
GDPIVREEKVSEGRTETYILCVQDRQDVTGKYLSRAYMQTDEKLQPAVGFQFNRQGARRF
GQLTREHLPEEGDAFRYQLAILLDNLVMSAPSINSEIRDSGIIEGGGQGFKVKEVQHLIN
ILQAGSLPASLDPTPLQEENVGPTLGEDSIAKGWRAIWVSMLVVPVFMIIYYRFAGVVAV
VALVVNMILLVGSMAFIQATFSLPGLAGLALTIGMAVDANVLVFERMREEKERGAGLAQQ
IRNGFNRAWVTIFDSHVTNLLAAIVLYAVGTEEVKGFALTMILGMLWNLFTAVFMSRHIF
ETAYARGWLRELHFRQMLDKTNIDFVGPRYYCMAVSLVVILLGLGAFFARGRTMYNIDFT
GGTLVTIRLNEADATVRSLSSSQRTELVREKAGVLPDVTIESLRVSQNQKEQAARFNIRT
TEQDSQKVKNQIIEAFGPSLAKIDMTVGPEKAIGEPAAPASASAAAKSAPSMVARFAGGR
EYELAFNTTSFNSTQPPAQVVSSEFARVLDAAGIVNPNSRFEITAAGSGGKARAEGTKLI
LKTDLEPDVAKAELEALKDSLANNRDMLFERIANFGSTVASETRTLALIATVASWIIIVA
YLWWRFHSFTYGLAAVLAVVHDVLITLGAIAVSYWLALVPGLNTLLMIDQFKIDLPIVAA
FLTLIGFSVNDTIVIFDRIREIKGKTPHLTPQLVNAAINQTLSRTILTSLTAWLVVVVLY
VLGGEGLHGFAFALVVGFLSGTYSTVYIATPILIDWIGHEEATHGALAKPGDKSKAVTSR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccttgtgaactggaagagcatcttgatcgtgggatcgaccctcctgggcctg
atcgccatgtctccccccgagaagaagttgaagctgggcatcgacctctccggagggacg
atcctcgtctacgaggtcgccaaggagagtacgtcgtccggcaacttcaacatggaggag
ctgatcgccgcgctgaagcagcgggccgacccgcagggggtcaaggagacgccgatccgc
aacatcggcaacaaccggatcgagatcatcctgccgaaggcgagcccggaggaggtcgag
gagatcaagaagatgctgacggacgtcggctcgcttgagttccggatcctcgccaaccag
aagcacgactccgaggcgatcgcccgcgcgatgggccccggcggcctggccaagcccccc
gcgcgctacaagtgggcgcggctgggcgaggtctccaccgggaccgagccccagttcacc
gaggcctcgatcaccgacccccagcagaactggaagcgcgacctctacgccggggtggaa
gtcgtcctgaccggcaaggacgcgaccggcgccgacaagacgctggcgatcccgatcctc
cggaacacgaacgacacgctcaccctggccgagccccacaacctcggctcgatcgcctcg
taccgggtcgagtacaaccccagcgggatccgcggcggcgacccgaccaacccccgcccg
ggcgacccgatcgtccgcgaggagaaggtctccgagggccgcaccgagacctacatcctc
tgcgtccaggaccgccaggacgtcaccggcaagtacctctcgcgggcctacatgcagacc
gacgagaagctccagccggcggtcggcttccagttcaaccgccagggcgcccgccgcttc
ggccagctcacccgcgagcacctgcccgaggagggggacgccttccgctaccagctggcg
atcctgctggacaacctggtgatgtcggccccgtcgatcaactcggagatccgcgactcg
gggatcatcgaggggggcggccaggggttcaaggtcaaggaggtccagcacctcatcaac
atcctccaggccggcagcctgccggcgagcctcgacccgacgccgctccaggaggagaac
gtcggcccgacgctcggcgaggactcgatcgccaagggctggcgggccatctgggtctcg
atgctcgtcgtccccgtcttcatgatcatctactaccgcttcgccggcgtggtggcggtg
gtggccctggtcgtcaacatgatcctcctggtgggctcgatggccttcatccaggccact
ttctcgctccccggcctggccgggctcgccctgacgatcggcatggcggtcgacgccaac
gtgctggtcttcgaacgcatgcgcgaggagaaggagcgcggcgccgggctggcgcagcag
atccgcaacggcttcaaccgggcctgggtgacgatcttcgactcccacgtcaccaacctg
ctcgcggcgatcgtgctctacgccgtcggcaccgaggaagtgaagggcttcgccctgacg
atgatcctgggcatgctctggaacctgttcaccgccgtcttcatgtcgcggcacatcttc
gagaccgcctacgcccgcggctggctgcgcgaattgcacttccgccagatgctggacaag
acgaacatcgacttcgtcggcccccgctactactgcatggccgtctccctcgtcgtgatc
ctgctgggcctgggggcgttcttcgcccgcggccggacgatgtacaacatcgacttcacc
ggcggcaccctggtgaccatccggctgaacgaggccgacgccaccgtccgcagcctctcc
tccagccagcggaccgagctcgtccgcgagaaggccggcgtcctccccgacgtcaccatc
gagagcctccgcgtcagccagaaccagaaggagcaggcggcccggttcaacatccggacc
accgagcaggactcgcagaaggtcaagaaccagatcatcgaggcgttcggcccgtcgctc
gccaagatcgacatgaccgtcggccccgagaaggcgatcggcgagcccgcggccccggcg
tcggcgtccgccgcggcgaagtccgccccctcgatggtcgcccggttcgccggcggccgc
gagtacgagctggcgttcaacaccacctcgttcaacagcacccagcccccggcccaggtg
gtctcgtccgagttcgcccgggtcctcgacgccgccgggatcgtcaacccgaactcgcgg
ttcgagatcaccgccgccggctccggcggcaaggcccgcgccgaggggaccaagctgatc
ctcaagaccgacctggagcccgacgtcgccaaggccgagctggaagccctgaaggactcg
ctggcgaacaaccgcgacatgctcttcgagcggatcgccaacttcggcagcacggtcgcc
tcggagacccggaccctggccctgatcgccaccgtggcgagctggatcatcatcgtggcc
tacctctggtggcggttccactcgttcacctacggcctggccgcggtgctcgccgtcgtc
cacgacgtcctcatcaccctgggggccatcgccgtcagctactggctggcgctcgtcccg
ggcctgaacacgctcctgatgatcgaccagttcaagatcgacctgccgatcgtcgcggcc
ttcctcacgctcatcggcttctcggtgaacgacacgatcgtcatcttcgaccgcatccgg
gagatcaaggggaagaccccccacctcaccccgcagctggtcaacgccgccatcaaccag
accctcagccggacgatcctgacgtcgctgaccgcctggctcgtcgtcgtcgtcctctac
gtcctcggcggcgaggggctccacggcttcgccttcgccctggtcgtcggcttcctcagc
ggaacctacagcaccgtctacatcgccaccccgatcctcatcgactggatcggccacgag
gaagcgacccacggcgccctcgccaagcccggcgacaagtccaaggccgtcacctcgcgg
taa
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