Planctomyces sp. SH-PL62: VT85_01600
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Entry
VT85_01600 CDS
T04401
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plh03009
]
VT85_01600 (rluD_1)
Enzymes [BR:
plh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT85_01600 (rluD_1)
Ribosome biogenesis [BR:
plh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT85_01600 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF1062
Motif
Other DBs
NCBI-ProteinID:
AMV36108
LinkDB
All DBs
Position
complement(419316..420227)
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AA seq
303 aa
AA seq
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MKVRLDKLVAERFQLSRRAAREAVERGQVDVGGARRIDPAEEIGPDDELSFHPNRPRVDL
AERRLTVLYEDRDVMIVDKAPGLLVQPTQLRERDTLLERAGRYQIHKRGVKKPYVGIVHR
IDQLTSGVILLVTSPRALRPFQELFRTHTIEREYLAVVEGVFLTPEGSIDLPLVDDAGDN
RRGVSREPGVGVPATTHFRVIESYGTVASLVAIRLETGRTHQIRIHLAALDHTVVGDPVY
GRRGRPKFPVRFRRQALHAASLGFIHPLSGQSIRVEAPVPTDFTNLTDELKHEYGVIRVD
EQG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacggctcgacaagctcgtcgccgagcgattccagctctcccgccgcgccgcg
cgcgaggcggtcgagcgcggccaggtcgacgtcggcggcgcgcggcggatcgacccggcc
gaggagatcgggcccgacgacgagttgtcgttccaccccaaccggccccgggtcgacctg
gcggaacggcggctcaccgtcctctatgaagatcgcgacgtgatgatcgtggacaaggcc
cccggcctgctcgtgcagcccacgcagctccgcgagcgcgacaccctgctggaacgcgcg
ggtcgctatcagatccacaagcggggcgtgaagaagccttacgtcgggatcgtccaccgg
atcgaccagctcacctccggcgtgatcctgctggtgacctccccgcgcgccctgcggccg
ttccaggagctgttccggacccacacgatcgagcgcgaatacctcgcggtggtggagggg
gtcttcttgacccccgaggggagcatcgacctcccgctggtggacgacgccggcgacaac
cgccggggggtctcgcgcgagcccggcgtgggcgtcccggcgacgacccacttccgcgtg
atcgagagctacggcaccgtcgccagcctcgtcgccatccgcctggagaccggccggacg
caccagatccgcatccacctcgcggcgctcgaccacacggtcgtgggcgatcccgtctac
ggccgccgaggccggcccaagttcccggtccgcttccggcgccaggcgctccacgccgcg
tccctcggcttcatccacccgctctccggccagtcgatccgcgtcgaggccccggtcccc
accgacttcaccaacctgaccgacgagttgaagcacgagtacggcgtcatccgggtcgac
gaacagggctga
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