Planctomyces sp. SH-PL62: VT85_01725
Help
Entry
VT85_01725 CDS
T04401
Symbol
rpsA_1
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
VT85_01725 (rpsA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
S1
HHH_9
HHH_7
S1_RRP5
YqgF
HHH
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AMV36133
UniProt:
A0A142YAA7
LinkDB
All DBs
Position
450241..453714
Genome browser
AA seq
1157 aa
AA seq
DB search
MDNPIQVDLGRIAQDLQIRRVQVESVVQLLDEANTVPFITRYRKERTGNLNEVVIREIQI
RIQRLRELAERKETILKTIDKQGKLTPELDAAIRSAENLKRLEDLYLPFKPKKRTKASEA
REKGLEPLAARIWNRDETLTDLIAAAQEFVDAEKGLDTPEKVLEGVRYILAEAISEMAAV
REAVRKAVWKTGKLVTSKGEVPEGQGLEYRDYFEYSEPVAQVPPHRVLAINRGDKEGPLK
VKLEVSRPDLEAAFFGQLPLEGHPQADAFHASAVDALERLILPSMEREVRHDLTETAEKH
AVDVFARNLRSLLLQPPIPKQVVLAIDPGLRSGCKVAVLDPNGGLLEQGIIYPHAPQGRR
SEAKVFLKDLVAKHQVNVVAIGNGTACRETEELVAEIIAEGHEFSTDPEARAAAEAAVAA
AIAAAPPRRETQREREPQAAATETVGEPVAEAPAEDGAEHQAHPVEHEVETGAEVAAETE
VAAETEVAAVSESSSVEAPASAASEPSAPEEAPAPIAEAEASPFTVPDDFQAEGEEEEEL
PPISGGAPDSITPETETGEPAQPASHEHQAHPAAEAAAPVETAAPEPTASVETPASTEVA
AEPTASPESPAEAAAETPAPSEAEAPAEATAETPAADATVETPAAAEGGQSKSGRSEGGS
RGEGRRGKNRGSRSRNQQPPPQLPPAPHEADALLAQLAYVIVNEAGASVYSASPIGREEL
PEFDATLRSAISIGRRLQDPLSELVKIEPQNIGVGLYQHDVSPKQLKESLDAVIASCVNF
VGVDLNTASVPLLRYVSGLNQLTARRIADRRTEKGPFTSRDELIEVDGVGPATFTQAAGF
LKIGDGPHPLDRTWVHPESYAAATRLLEKFEYAPDVVRDKEKLPELRAKLAEVDVPALAA
ELEIGEPTLKDIIEALGRPERDPRDDLPKPIFKKGVLKLEDLTAGMELKGTVLNVVDFGA
FVDIGLKDSGLVHISQLANRYIKSPHDVVSVGDVVTVWVMSVDQDRKRVSLTMVKPGTER
HRGPGGPSGGGRRGEGAPQGQGGEGQGRRGRGPRPSPSNLTAPPWAPRRSIPDRKGAIRA
RAGSDPAAPDDLPVRAAIAPAAAPARGAAVLAPAAAAPTDATAVASAARGRTRAPRGRSR
RDRPGRPPLPRRSRRTP
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccgattcaggtcgacctgggccgaatcgcgcaagacttgcagatccggcgc
gttcaggtggaaagcgtcgtccagttgctggacgaagccaacaccgtcccgttcatcacg
cgctataggaaagagcggaccggcaacctcaatgaggttgtgatccgcgagatccagatc
cgcatccaaaggcttcgcgagctcgccgagcgtaaagaaacgatcctcaagacgatcgac
aagcaggggaagctcacccccgagctcgacgccgccatccgatcggccgagaacctcaag
cggctggaagacctctatctgccgttcaagcccaagaagcggaccaaggcttcggaggcg
cgcgagaagggcctggagcccctggccgcccggatctggaaccgcgacgagaccctgacc
gacctcatcgccgccgcccaggaattcgtcgacgccgagaagggcctcgacacccccgag
aaggtcctcgaaggggtccggtacatcctcgccgaggcgatcagcgagatggccgccgtc
cgcgaggccgtccgcaaggccgtctggaagaccggcaagctcgtgacctccaagggcgag
gtccccgagggccagggcctggaatatcgcgactacttcgagtacagcgagcccgtcgcc
caggtcccgccgcaccgcgtgctggcgatcaaccgaggggacaaggaaggcccgctcaag
gtcaagctcgaagtctcgcggcccgacctggaagccgcgttcttcggccagctcccgctc
gaaggccatccccaggccgacgccttccacgcctccgccgtcgacgcgctcgaacggctg
atcctgccgagcatggaacgcgaggtccggcacgacctgaccgagaccgccgagaagcac
gcggtcgacgtcttcgcccgcaacctccgcagcctgctgctccagccccccatccccaag
caggtcgtgctggcgatcgacccgggcctccgctccgggtgcaaggtcgcggtgctcgac
cccaacggcggcctgctggagcaagggatcatctatccccacgccccccagggacgccgc
tccgaggccaaggtgttcctcaaggatctggtggcgaagcatcaggtgaacgtcgtcgcc
atcggcaacggcaccgcctgtcgcgagaccgaggaactggtcgccgagatcatcgccgaa
gggcatgagttcagcaccgaccccgaagcccgcgccgccgccgaggccgccgtcgccgcc
gcgatcgccgccgcacccccgcgtcgcgagacccagagggaacgcgagccgcaggccgcc
gcgaccgagactgtcggcgagcccgtcgccgaggccccggccgaggacggcgccgagcat
caggcccaccccgtcgagcatgaggttgaaacgggagccgaagtcgcagccgaaaccgag
gtggcggccgaaaccgaggtcgcggccgtgagcgagtcctcctcggtcgaagcccccgcg
tcggccgcgagcgaaccctccgcgcccgaagaggcccccgccccgatcgccgaggccgag
gcgtcccccttcacggtcccggacgatttccaggccgagggtgaggaagaggaagagctg
ccgcccatctccggcggcgccccggactcgatcacccccgaaaccgagaccggcgagccg
gcgcagcccgcctctcacgagcaccaggcccatcccgcggccgaggcggcggcccccgtc
gaaactgcggcgcccgagccgacggcctccgtcgagactccggcgagcaccgaggtcgcg
gccgagccgaccgcgagccccgagtcgcccgccgaggccgcggccgaaacgcccgcgccc
tctgaagctgaagcgcccgccgaggccacggccgagacgccggcggccgacgcgaccgtc
gaaactccggccgccgccgaggggggccagtcgaagtcgggccgctccgaaggaggctcc
cggggcgaaggccgtcgcggcaagaaccgcgggtcgcgctcccgaaaccagcagcccccg
ccgcagttgccccccgcgccccacgaggccgacgccctgctggcccagctcgcctacgtg
atcgtcaacgaggccggcgccagcgtctattcggccagcccgatcggacgcgaggaactg
cccgagttcgacgccacgctccgcagcgccatctcgatcggccgtcggctccaggacccg
ctctccgagctggtcaagatcgagccccagaacatcggcgtcggcctttaccagcacgac
gtcagccccaagcagctcaaggagtcgctcgacgcggtcatcgccagctgcgtgaacttc
gtcggcgtggacctcaacaccgcgagcgtccccctgctccgctacgtgtcgggcctcaac
cagctcacggcccgtcggatcgccgatcggcgcacggagaagggcccgttcaccagccgc
gacgagctgatcgaggtcgacggggtcggtccggcgaccttcacccaggccgccggcttc
ctcaagatcggcgacggcccccatccgctcgaccggacgtgggtccaccccgagagttac
gccgccgcgacccggctgctcgagaagttcgagtacgctccggacgtcgtccgcgacaag
gagaagctccccgagctgcgggcgaagctcgccgaggtcgacgtccccgcgctcgccgcg
gagctggagatcggcgagccgacgctcaaggacatcatcgaggccctcggccgtcccgaa
cgggacccccgcgacgacctgcccaagccgatcttcaagaagggggtcctcaagctggag
gacctgaccgccggcatggagctgaaggggacggtcctgaacgtcgtcgacttcggcgcg
ttcgtggacatcggcctgaaggactccgggctggtgcacatcagccagctcgccaaccgc
tacatcaagagcccgcacgacgtggtcagcgtcggcgacgtggtcaccgtctgggtgatg
tcggtcgaccaggaccgcaagcgggtctccctgacgatggtcaagcccggcaccgaacgc
catcgcggccccggcggcccgtccggcggcggtcgtcgcggcgaaggggcgccccagggc
cagggtggcgaaggtcagggccgtcgcggccggggcccgcgccccagcccgtcgaacctg
accgcccccccgtgggcgccgcgccgatcgattcccgaccggaagggggcgatcagggcc
cgcgccggttcggacccggcggccccggacgacctcccggtcagggcggctatcgcaccg
gcggcggccccggccaggggcgcggcggtcctcgcgccggcggcggcggcgcctacggac
gcgacagcggtcgcttcggcggcccgaggccggacccgcgcacccaggggccggtcgcgc
cgcgaccgccccggccggccgcccctcccccgccgctctcgaaggacgccctga
DBGET
integrated database retrieval system
