Planctomyces sp. SH-PL62: VT85_01945
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Entry
VT85_01945 CDS
T04401
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_01945 (phr)
Enzymes [BR:
plh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VT85_01945 (phr)
DNA repair and recombination proteins [BR:
plh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VT85_01945 (phr)
Prokaryotic type
VT85_01945 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMV36176
UniProt:
A0A142YAD5
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All DBs
Position
complement(510601..512004)
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AA seq
467 aa
AA seq
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MSGPSLERLLAPHPRVRAARDGAPASDGACVVYWMQRAQRGVDNPALNMAIAVGDAIGKP
VIAVFGLTADYPAAQRRHYRFLVEGLVDARADLERRGVPLVVRLGSPEEVVPAFAEEVGA
AFVVGDENPVRVGRRWREVVARALKVPFHLVDADVVVPTSLFPKEEYAARTLRPKIHRVW
DEYLKPIPEIRARQPWPGEIPDGAEIEPDSLMKALRVGGVGEVPGYVGGTREAMRRLKRF
LDERLHRYAEDRNEPTPYCTTELSAHLHYGHISPTTIALAAIQSDGPREGIDVLLEELIV
RRELAINFVARNPDYDSLAGCPEWARKTLAKHADDPRPVVYTSDQLERAETHDPLWNASQ
KEMTLTGRMHNYLRMYWAKKILEWSPTAEQAFAVAVELNDRYEMDGRDPNGYTGVAWAVG
GKHDRPWPERPIFGTVRFMSYESTRKKFDSAGYIRRVESIAKQQGQA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaccatccctggaacgtctcctcgccccccaccctcgcgtgcgggcggcccgc
gacggggctcccgcttcggacggggcgtgcgtcgtctactggatgcaacgcgcccagcga
ggggtcgacaatccggcgcttaacatggcgatcgccgtgggcgacgcgatcggcaagccg
gtgatcgccgtcttcggcctcaccgccgactatccggccgcccagcgtcggcattatcgc
ttcctcgtcgagggcctggtcgacgcccgagccgacctggagcgccggggggtgccgctg
gtcgtcaggctgggatcgcccgaggaggtcgtccccgccttcgccgaggaggtcggggcg
gcgttcgtcgtcggcgacgagaaccccgtccgcgtgggccgacgctggcgcgaggtcgtc
gcccgcgccttgaaggttccgttccacctggtcgacgccgacgtcgtcgtccccacctcg
cttttcccgaaggaggagtacgccgcgaggacgctccggcccaagatccaccgcgtctgg
gacgaatacctgaagccgatccccgagatccgagcccgccagccctggcccggcgagatc
cccgacggcgcggaaatcgagcccgactcgctgatgaaggcgctccgggtgggaggcgtg
ggagaagtccccggctacgtcggcggcactcgcgaggcgatgcggcggctgaagcgattc
ctcgacgagcgtctgcacaggtacgccgaggaccgcaacgagccgacgccctattgcacc
acggaactctccgcccacctccattacggccacatcagcccgacgacgatcgccctggcc
gcgatccagagcgacggcccgcgcgaggggatcgacgtcctgctcgaagagctgatcgtc
cgtcgcgagttggcgatcaacttcgtggcgcgcaaccctgactatgattcgctggccggc
tgccccgagtgggcgaggaagaccctcgccaagcacgccgacgaccctcggccggtcgtc
tacacctcggaccagctagaacgggccgagacccacgacccgctctggaacgcctcccag
aaggagatgacgctcaccggccggatgcacaattatctgcgaatgtactgggccaagaag
atcctggagtggtcgccgaccgccgagcaggcgttcgcggtcgcggtcgagctgaacgat
cgctacgagatggacggacgcgaccccaacggctacacgggggtcgcctgggccgtcggc
ggcaagcacgaccgcccctggcccgaacgccccatcttcggcaccgtccgcttcatgagc
tacgagagcacccgcaagaagttcgactccgcaggctacatccgccgcgtcgaatcgatc
gcgaagcagcagggccaggcgtga
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