Planctomyces sp. SH-PL62: VT85_02190
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Entry
VT85_02190 CDS
T04401
Symbol
afsR
Name
(GenBank) Regulatory protein AfsR
Organism
plh
Planctomyces sp. SH-PL62
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IFT140_1st
NB-ARC
Beta-prop_DCAF4
Cytochrom_D1
Beta-prop_IP5PC_F
Beta-prop_HPS5
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
VPS8_N
Beta-prop_EIPR1
APAF1_C
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Dark_WHD
APAF-1-like_WHD
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AMV36224
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Position
complement(571385..574531)
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AA seq
1048 aa
AA seq
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MARPEEFGRLRELLLASDPGKSVAITTALRGAGGLGKTTLATALCHDPEIRKAHPDGVLW
TTLGQQPDLPTALARLIETLTGEPAAVRDVEDGSRRLADELAGRPCLLVLDDVWDAAHLR
PFLRGAVRCTRLVTTRQFEVAVEARRVEVDAMTPEQGVAMLLSRVEASDATYGSFLSLAR
RLGEWPLLLELAGSALRLRVARGDSIEGALDYLNRGLDRKGVDVLARPKSGERNDSFAAS
IGLSTDLLEAEDRRRFTELAIFPEDVDIPLAAAAALWGLDDYEAEELSQRLADLSLLRLD
LRAQTLSLHDVIRAYLADEVSDPAPLHARLLDSWGDLHQLPDAYAWRWLAYHLIHAGRQE
VLRGLLLDPRWLSKKLQAADSNALLADFEALRGDPELALVEGAIRLSAHALSRDASLFAG
QMIGRLHGSESAAIRDFLPRVQRNQRGPWLRPLAEALTPPGGALIRTLEGGGGGIRAVAA
SADGRRALSGSSDGTLRLWDLDSGTSIRTFEGCGGGVLAVAMSADGRRAVSGSDDGTLRL
WDLDAHAPIRELEGHGGPVRAVAASADGRRAVSGSDDGTLRLWDLDSGVSIRTLEGHEGR
LRAVAMSTDGRRAVSGSDDGTLRLWDLDAHAPIRELEGHGGPVRAVAASADGRRAVSGSD
DGTLRLWDLDSGVSIRTLEGHEGRLRAVAMSADGRRAVSSSDDGTLRLWDLDSLASIRTL
KGGGGIRAVAASADGRRAVSGSEDGTLRLWDLDSLASMHTFEACSGQVRAVAASADGRRA
VSNDDDGTLRLWDLDSGASIRTLPNRRTGMNAVAASGDCRLVLCGFNDGTLSLWDLGSGS
LIRPLEGHDGPVLALAMSADGRRAVSGLTDGTLRFWDLDSGESISTRAGHRDWVLAVTAS
ADGRRAVSGSYGGTLKLWDLDSGASIRTLPNRRTGMNAVAASGDCRLVLCGFNDGTLSLW
DLGSDALLLRIEGHDDRVTTLAMSADGRRAVSGSDDRTMKVWDLGTGILLAEFVGDGPYH
ACAIADDAVTIVAGDLLGRVQFLRLEGV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
gtggctcggcccgaggagttcggtcggctgcgtgagctgctcctagcctccgatccgggg
aagtccgtcgcgatcacgaccgctctccgtggcgccggcgggttgggcaagacgaccctg
gcgaccgccctctgccacgaccccgagatcaggaaggcccatcccgacggcgtcctctgg
accacgctcggccagcagcccgacctgccgaccgcactggcccgcctcatcgagaccctc
accggcgagcccgcagccgtccgcgacgtcgaggacggctcgcgccgactggcggacgaa
ctggcgggacggccttgcttgctcgtcctggacgacgtctgggacgcggcccacctgcgt
cccttcctgcgcggggccgttcgatgcacccgtctggtcacgactcgacagttcgaagtc
gcggtcgaagcccgtcgcgtggaggtcgacgcgatgacccccgagcagggcgtagcgatg
ctcctttcgcgggtcgaggcttcggatgcgacgtacggttcgttcctgtccctggcccgt
cgcctcggcgagtggcccctgctgctggaactggccggctcggcgctgcgacttcgggtc
gcgcggggcgactcgatcgaaggggccctcgactacctcaacaggggcctcgaccgcaag
ggcgtggacgtactcgctcggccgaaatcgggcgagcgaaacgactcgttcgccgcctcg
atcgggctcagtacggacctgctggaggccgaggatcgtcgccgcttcaccgaactggcg
atctttcccgaagacgtcgacatccccctcgccgcggcggcggccctatgggggctcgac
gactacgaggccgaggaactctcccagcgtctggccgacctgtcgctgctcaggctcgac
ctgcgagcccagaccctcagcctgcacgacgtgatccgggcctacctggcggacgaggtc
tccgacccggctccgcttcacgcccggctgctcgactcctggggcgacctccatcaactg
ccggacgcctacgcctggcggtggctcgcctaccacttgatccacgcgggacggcaggag
gtcctgcggggactcctcctggatccccgctggctttcgaagaagctccaagccgccgac
tccaacgccttgctggccgacttcgaggcgctccgcggcgacccggagctggcgctcgtg
gagggagccatccgactctccgcccacgccctctcccgcgacgcctctctgttcgccggc
cagatgatcggccgcctgcacggctcggagtccgcggcgatcagggacttcctgccccgc
gtccagcgcaaccagcgtggtccctggctgcgtccgctggccgaggcgttgacccctccc
ggcggtgcgctgattcgcacgctggaaggcggcggcggtgggattcgtgcggtggcggcg
tcggccgacggccgccgcgccctctccggctccagcgacgggacgctcagactctgggac
ctggactcgggcacttcgattcgcacttttgaagggtgcggcggaggagtccttgcggtg
gcgatgtcggccgacggccgacgcgccgtctccggctccgacgacggcacgctcaggctc
tgggatctggacgcgcacgccccgattcgcgagctggagggccacggcggcccggtccgt
gcggtggcggcgtcggccgacggccgccgcgccgtctccggctccgacgacggcacgctc
aggctctgggacctggactcgggcgtctcgattcgcaccctcgaaggccacgagggccgg
ctccgtgcggtggcgatgtcgaccgacggccgacgcgccgtctccggctccgacgacggc
acgctcaggctctgggacctggacgcgcacgccccgattcgcgagctggagggccacggc
ggcccggtccgtgcggtggcggcgtcggccgacggccgccgcgccgtctccggctccgac
gacggcacgctcaggctctgggacctggactcgggcgtctcgattcgcaccctcgaaggc
cacgagggccggctccgtgcggtggcgatgtcggccgacggccgacgcgccgtctccagc
tccgacgacggcacgctcaggctctgggacctggactcgctcgcctcgattcgcacgctg
aaaggcggcggtgggatccgtgcggtggcggcgtcggccgacggccgccgcgccgtctcc
ggctccgaagacggcacgctcaggctctgggacctggactcgctcgcctcgatgcacact
tttgaggcgtgcagcggccaagtccgtgcggtggcggcgtcggccgacggccgccgcgcc
gtctccaacgacgacgacgggacgctcagactctgggacctggactcgggcgcctcgatt
cgtacgctgccgaaccgaaggacgggcatgaacgcggtggcggcgtcgggcgactgccgc
ctcgtcctctgcggcttcaacgacgggacgctcagcctttgggacctgggctcgggctcg
ctgattcggccgctggaggggcacgacggcccggtccttgcgctggcgatgtcggccgac
ggccgacgcgccgtctcgggcttgaccgatgggactctcaggttctgggaccttgactcc
ggtgagtcaatcagtacgcgggcgggacaccgcgactgggtcctggctgtgacggcgtcg
gcagacggtcggcgcgccgtctccggctcttacggagggacgctcaagctctgggacctg
gactcgggcgcctcgattcgtacgctgccgaaccgaaggacgggcatgaacgcggtggcg
gcgtcgggcgactgccgcctcgtcctctgcggcttcaacgacgggacgctcagcctttgg
gacctgggctcggacgcattgcttctcaggatcgaggggcacgacgaccgggtcaccacg
ctggcgatgtcggcagacggccgacgcgccgtctccggctcagatgaccggacgatgaag
gtgtgggacctgggaaccgggattctcctcgcggaattcgtcggcgacggcccctaccac
gcatgcgcgatcgcggacgacgcggtgacgatcgtcgcgggggacctgctgggtcgggtc
caatttttgaggctggaaggcgtttag
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