Planctomyces sp. SH-PL62: VT85_03165
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Entry
VT85_03165 CDS
T04401
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT85_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_03165
Enzymes [BR:
plh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VT85_03165
DNA repair and recombination proteins [BR:
plh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT85_03165
Prokaryotic type
VT85_03165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMV36405
UniProt:
A0A142YB54
LinkDB
All DBs
Position
815556..816212
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AA seq
218 aa
AA seq
DB search
MKTDAAVRASERSRRRLVTLNAEIRDCRRCHAAGFLDEAESVPIARDPEADAPPPQILLV
GQAPGLRATITDRPFAGVAGNKLRDWFEQGGIPREDFWRKIHFSAVTRCYPGRLPGAKGD
RVPSPPEQVLCRPWLDGVVEAVRPRVVLLVGLLAVRTFLGPVKSLSAVVGTSTLRDGVLY
IPLPHPSGVSRWLNEPANVQAVARAMSLLREVVDVHQL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggacgccgccgtccgggcgtcggaaagatcccgacgtcgactcgtgacgctc
aacgccgagatccgcgactgccggcgctgccatgcggccgggttcctggacgaggccgaa
tccgtaccgatcgcgcgagaccccgaggccgacgccccgccgccgcaaatcctgctggtc
gggcaggcgccgggacttcgggcgacgatcaccgaccggccgttcgccggcgtcgcgggg
aacaagctccgtgactggttcgagcaagggggcatccctcgcgaggacttctggcggaag
atccacttctcggccgtcacgcgttgctaccccggccgcctcccgggcgcgaagggtgac
cgcgtcccatccccgccggagcaggtgctctgtcggccctggctcgacggcgtcgtcgaa
gccgtccgaccccgcgtcgtcctgctcgtcggcctgctcgccgtgcggacgttcctcggt
cccgtcaagtccctgtccgccgtcgtcggcacgtccactctccgcgacggggtgctctac
atcccgctcccccacccctccggcgtcagccgatggctcaacgagcccgcgaacgtccag
gccgtcgcccgcgcaatgagcctcctccgcgaggtcgtcgacgtccaccaactctga
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