Planctomyces sp. SH-PL62: VT85_04890
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Entry
VT85_04890 CDS
T04401
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00730
Thiamine metabolism
plh01100
Metabolic pathways
plh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VT85_04890 (thiC)
Enzymes [BR:
plh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VT85_04890 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AMV36744
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Position
complement(1261614..1262951)
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AA seq
445 aa
AA seq
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MTQIEQARKGVVTPEMEHVARREGLDAETVRSEIARGRMIIPANTVHLGLGLEPMGIGIK
TKCKINANIGNSAVTSDVDNELAKLKLAVDLGADTVMDLSTGGRIDDIRQAIIKASKVPI
GTVPMYQAIQQVKKVEDLTADDLLAMIEHQAQQGVDYMTLHIGILRDYIPLTAHRLTGIV
SRGGSLMAQWMIAHNKENPLYTRFDDICDIMRQYDVSFSLGDSLRPGSLADASDAAQFAE
LKTLGELTRRGWERGCQVMVEGPGHIPMDQIAMNMEKQAVECSEAPFYVLGPLVTDIAPG
YDHITSAIGAALAGWHGASMLCYVTPKEHLGLPEVEDVRQGVVAYKIAAHAADLARHRPG
ARDRDDALSRARYSFDWEEQFRLSLDPETARRMHDETLPQEAFKTAAFCSMCGPKFCSMR
ISEDIRKHALATTSLVQLEPLAAGS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagattgaacaggcccggaagggcgtcgtcacccccgagatggagcacgtcgcc
cgccgcgagggactcgacgccgagacggtccgctcggaaatcgcccggggacggatgatc
atcccggccaacacggtccacctcggcctgggcctggagccgatgggcatcggcatcaag
accaagtgcaagatcaacgccaacatcggcaactcggccgtcacctccgacgtcgacaac
gagctggccaagctgaagctggccgtcgacctcggcgccgacaccgtgatggacctctcc
accggcggccggatcgacgacatccgccaggcgatcatcaaggccagcaaggtccccatc
ggcaccgtgccgatgtaccaggcgatccagcaggtcaagaaggtcgaggacctgacggcc
gacgacctcctggcgatgatcgagcaccaggcccagcagggggtcgactacatgaccctg
cacatcggcatcctccgcgactacatcccgctgacggcccaccgcctgaccggcatcgtc
tcgcggggcggctcgctgatggcccagtggatgatcgcccacaacaaggaaaaccccctc
tacacccgcttcgacgacatctgcgacatcatgcggcagtacgacgtctccttcagcctg
ggcgacagcctccgccccggctcgctggccgacgcctccgacgccgcccagttcgccgag
ctgaagaccctgggcgagctcacccgccggggctgggagcgtggctgccaggtcatggtg
gagggtccggggcacatccccatggaccagatcgccatgaacatggagaagcaggccgtc
gagtgcagcgaggccccgttctacgtcctcggcccgctggtcaccgacatcgcgccgggg
tacgaccacatcacctcggccatcggcgcggccctcgccggctggcacggcgcgagcatg
ctctgctacgtcacccccaaggagcacctggggctccccgaggtcgaggacgtccgccag
ggggtcgtcgcctacaagatcgcggcccacgccgccgacctggcccgccaccgccccggc
gcccgcgaccgcgacgacgccctctcccgggcccgctacagcttcgactgggaggagcag
ttccggctctcgctcgaccccgagaccgcccgtcggatgcacgacgagaccctcccccag
gaagccttcaagacggccgccttctgcagcatgtgcggccccaagttctgctcgatgcgg
atctccgaggacatccgcaagcacgccctggcgacgacctcgctcgtccagcttgagccc
ctcgccgctggttcttga
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