Planctomyces sp. SH-PL62: VT85_05990
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Entry
VT85_05990 CDS
T04401
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plh03009
]
VT85_05990 (rsmE)
Enzymes [BR:
plh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
VT85_05990 (rsmE)
Ribosome biogenesis [BR:
plh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VT85_05990 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AMV36962
LinkDB
All DBs
Position
complement(1533848..1534561)
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AA seq
237 aa
AA seq
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MSQRFYCPQPPTDGRYRLDPDESRHLTRVCRRGVGDLVELFDGRGFATAARVVVAGKDAV
QLEAEGEPIVSPLPSCSIEVGSAVPKGDRFDWLVEKAVELGVDRIVPLVTERSVVDPRGS
KLERLRRTIVEASKQSGRSRLMELAPPEALPGFLRRPEGLRLLADPSGAPFDAWPAIQSG
STVRLVVGPEGGLTDEEVASAREAGWVPVRLASPILRIETAVLAGAASILARTQPVH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccagcgtttctactgcccccagccgccgaccgacggccgttaccgcctcgacccc
gacgagtcccgtcacctgacccgggtctgccgacgcggagtgggagacctcgtggagttg
ttcgacggccgggggttcgccaccgccgcccgcgtcgtcgtcgccggcaaggatgcggtc
cagcttgaagcggaaggcgagccgatcgtctcccctctcccctcctgctcgatcgaggtc
ggctcggccgtcccgaagggggaccgcttcgactggctcgtggagaaggcggtcgagctg
ggggtcgatcggatcgtgcccctggtcacggaacgttccgtcgtcgacccgagggggtcg
aagctggagcgcctgcggcggacgatcgtcgaggcgtcgaagcagtccgggcgaagtcgg
ctcatggagctggcgcctcctgaagccctgccgggattcctgcgacgccccgagggcctg
cggctcctggccgatccctcgggggccccgttcgacgcctggcccgcgatccaatccggc
tcgaccgtgcggctcgtcgtggggccggaagggggcctgaccgacgaggaggtcgcgtcc
gcccgcgaggcgggctgggtcccggtgcggttggcctcgcccatcctccgcattgagacc
gccgttctggccggggccgcttcgatcctggcgaggactcagccggtccactga
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