Planctomyces sp. SH-PL62: VT85_06535
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Entry
VT85_06535 CDS
T04401
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00541
Biosynthesis of various nucleotide sugars
plh01100
Metabolic pathways
plh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VT85_06535 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
VT85_06535 (hldD)
Enzymes [BR:
plh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VT85_06535 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
Core region
VT85_06535 (hldD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
Ldh_1_N
adh_short
ApbA
Motif
Other DBs
NCBI-ProteinID:
AMV37069
UniProt:
A0A142YD14
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All DBs
Position
1683992..1684978
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AA seq
328 aa
AA seq
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MIAITGAAGFIGSNLAHRLSAAGRELILVDHPLTAATAVNWAGLGRFRFVPMERFLLDLE
RGEGKAIEAIFHLGACSSTTETDWRFLLENNVGYTRSLWEWSAAEQRPFFYASSAATYGD
GSKGFSDRTPPTELEPLNLYGKSKNDFDAWALSEIAAGNPRPPAWAGLKFFNVYGPREIH
KGKMASVVWHARRQVLETGEVRLFRSNDPTYPDGGQRRDFVFVEDCIDHMLWLWEHPEAS
GIYNSGTGTARTFLDLVHAVFAALDREPRIQFIDMPPELGRQYQNYTQADMSKLRDAGFA
RQPTPLEEGVRRTLSWEDAPTIAVTPPA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgatcacgggagccgccggattcatcggttcgaacctcgcccatcggctgtcg
gcggcggggagggagctgatcctggtcgaccaccccctgacggcggccacggcggtcaac
tgggccgggctgggccggttccgcttcgtgccgatggagcggttcctcctggacctggag
cggggcgaggggaaggcgatcgaggccatcttccacctgggcgcgtgcagctccaccacc
gagaccgactggcggttcctgctggagaacaacgtcggctacacccgcagcctctgggag
tggagcgccgccgagcagcggcccttcttctacgcgtcgagcgccgcgacctacggcgac
ggctcgaaagggttcagcgatcgaacgcctccgaccgagctggagccgctcaacctctac
ggcaagagcaagaacgacttcgacgcctgggccctgtccgagatcgccgcggggaatccc
cggccgccggcctgggcgggcctcaagttcttcaacgtgtacggcccccgcgagatccac
aaggggaagatggcgagcgtcgtctggcacgcccgccgtcaggtcctcgagacgggcgag
gtccggctgttcaggtcgaacgacccgacctaccccgacggcggccagcgccgggacttc
gtcttcgtggaagactgcatcgaccacatgctctggctctgggagcacccggaggcctcg
ggtatctacaacagcgggaccgggacggcccggaccttcctggacctggtccatgcggtc
ttcgcggccctcgaccgcgagccccgaatccagttcatcgacatgccccccgaactcggc
cgccagtaccagaactacacgcaggctgatatgagcaagctccgcgacgcggggttcgcc
cgccagccgacgcccctcgaagaaggggtccggcggaccctttcctgggaagacgcgccg
acgatcgcggtcactcccccagcctga
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