Planctomyces sp. SH-PL62: VT85_07290
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Entry
VT85_07290 CDS
T04401
Symbol
sigA_4
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT85_07290 (sigA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plh03021
]
VT85_07290 (sigA_4)
Transcription machinery [BR:
plh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT85_07290 (sigA_4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
Motif
Other DBs
NCBI-ProteinID:
AMV37219
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Position
1896303..1897139
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AA seq
278 aa
AA seq
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MARIRRHRRDTVQSPLETYLREINEVALLTADEEKQLAYRIADGDDQARDRMVRANLRLV
VNIARGYVGKGLALQDLIEEGNLGLLRAVEGFDPAVGTRFSTYASYWIKQSIKRALVNTA
KPIRIPAYMVELLFKWRRTSAELQETLGRAATVEEIAKTLKLPKKKLAIVKKAIKVYNLV
PQTDQPENGWSLGEMLMDERTRAPDVEMVEADNLRMVMDRLDEMDKREATVLRMRFGLND
EEPKTLKEIGESLGLTRERVRQIENEALGKLSAQMQAD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcccggattcgacgacatcgccgtgatacggtgcagagccccctggagacttatctc
cgggagatcaatgaagtggccctgttgaccgcggacgaggaaaagcaactcgcctatcgg
atcgcggacggggacgaccaggctcgggatcggatggttcgagcgaacctccgcctggtg
gtcaatatcgcccggggctacgtcggcaagggcctcgcgctccaggacctgatcgaggaa
gggaacctcgggctgctccgcgccgtcgaggggttcgacccggccgtggggacgcggttc
agcacctacgccagctactggatcaagcaatccatcaaacgggcgctggtgaatacggcg
aagccgatccgcatcccggcctacatggtcgagttgctcttcaagtggcggcggacctcg
gccgagctgcaagagaccctggggcgggcggcgacggtcgaggagatcgccaagaccctg
aagctccccaagaagaagctggcgatcgtcaagaaggcgatcaaggtctacaacctcgtc
ccccagaccgaccagcccgagaacggctggagcctgggcgagatgctgatggacgagcgc
actcgcgcccccgacgtcgagatggtcgaggccgacaacctccgcatggtgatggatcgc
ctggatgagatggacaagcgcgaggccacggtcctccgcatgcgattcggcctcaacgac
gaggagccgaagacgctcaaggagatcggcgagtccctcgggctgacgagggagcgggtc
cggcagatcgagaacgaggcgctaggcaagctgtcggcgcagatgcaggccgactga
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