Planctomyces sp. SH-PL62: VT85_07405
Help
Entry
VT85_07405 CDS
T04401
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03030
DNA replication
plh03430
Mismatch repair
plh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT85_07405 (dnaX_1)
03430 Mismatch repair
VT85_07405 (dnaX_1)
03440 Homologous recombination
VT85_07405 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plh03032
]
VT85_07405 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_07405 (dnaX_1)
Enzymes [BR:
plh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT85_07405 (dnaX_1)
DNA replication proteins [BR:
plh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT85_07405 (dnaX_1)
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT85_07405 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_2
AAA_5
RCF1-5-like_lid
AAA_14
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMV37242
UniProt:
A0A142YDV9
LinkDB
All DBs
Position
1932364..1934256
Genome browser
AA seq
630 aa
AA seq
DB search
MSQGPASKTRVDIPAAPDARSENYTVVARRYRPQRFEDVVGQDHVVQALRNAIRLNRLAQ
AYLFCGTRGVGKTSMARIFAKCLNCVNGPTEEPCQVCDICQAISVGQDVDVIEIDGASNN
GVEQVRELRQNVSLRPSRSRFKIYYIDEVHMLSTGAFNALLKTLEEPPPHVKFFFATTEA
NKIPITVLSRCQRYDFAGISPEAIVGTLKEICDREQVEADLDALQIVARRAGGSMRDAQS
LLERMLSSGSPRLTPDVVHALLGTASDERLLAMIEALSGHDPATALTLLDQATSEGVQAS
ELLAGVIDFLRDAMVLSIGAEALTLTVAPRQKPRLQAAVDVWSTDAILAALQILAEARAR
MRGVSHGRLLAELAFVRIARLENLDELGEVVQRLKALESGSSPSPRPSAASAKTRLSQAD
SAASLGTGIGKPSNFVAPVEPLRAAPPLDSPAAPHRPSGPRSQPRRPEDDSPGGLERKPA
AEPGRRAEEPPPLDLEVIEKIWPDLLKKVGPSLSWRLSQAQPIGVDEPGVLVIAAKPGYN
SVADPCGTDEARSRIAECLQWLLQRPLKVRYESSQVGEAPADAPESGPRRLEQLMSDPLI
QKVVELFEARVSHFEPETRRDGDEAATPDH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaaggccccgcctcgaaaacgcgagttgatattccggctgcacctgacgcccgc
tccgagaactatacggtcgtcgcccgccgttaccgtccccagcgcttcgaggacgtcgtc
ggtcaggaccacgtcgtccaggcccttcgcaacgcgatccggctgaatcggctggcgcaa
gcctatctcttctgcggcactcggggcgtcggcaagacgtcgatggcccggatcttcgcc
aagtgcctgaactgcgtgaacgggccgaccgaggagccgtgccaggtctgcgacatctgc
caagcgatctccgtcggccaggacgtcgacgtcatcgagatcgacggcgccagcaacaac
ggcgtcgagcaggtccgcgagcttcggcagaacgtctcgctccgccccagccgctcgcgg
ttcaagatctactacatcgacgaggtccacatgctctccaccggcgcgttcaacgcgctg
ttgaagacgctggaggagccgccgccgcacgtcaaattcttcttcgccacgaccgaggcg
aacaagatcccgatcacggtcctctcgcgatgccagcgctacgacttcgcggggatctcg
cccgaggcgatcgtcggcaccctcaaggagatctgcgatcgcgagcaggtcgaggccgac
ctcgacgccctccagatcgtcgcccgccgcgccgggggctcgatgcgcgacgcccagtcg
ctgctcgaacgcatgctctcgtcggggagccctagactcaccccggacgtcgtccacgcc
ctgctcggcaccgccagcgacgaacgcctcctggcgatgatcgaggctctgtccggccac
gacccggccaccgccctgaccctgctggaccaggcgacctcggaaggggtgcaggcgtcc
gaactgctcgccggggtgatcgacttcctccgcgacgccatggtcctctcgatcggtgcc
gaggccctcacgctgaccgtcgcgcctcgacaaaagccgaggctccaggccgccgtcgat
gtctggtcgaccgacgcaatcctcgccgcgctgcagatcctcgccgaagcccgagcgcga
atgcgaggcgtttctcacggcaggctgctcgcggaactggcgttcgtgcgaatcgctcgg
ctggaaaatctcgacgagctgggcgaggtcgttcagcgactcaaggcgctggaatcaggc
tcctcgccatcgcccaggccttcggcagccagcgcaaaaacaaggctctcgcaggcggac
tcggccgccagcctggggaccggcatcggcaagccgtcgaatttcgtggccccggtcgaa
cctctgcgcgccgccccccctctggactcgcccgccgctcctcaccgcccctccgggcct
cgatcgcaacctcgccgccccgaagacgattctccaggggggttggaacgaaagccggcg
gccgagcccggccgacgtgccgaggaacccccgccgctggatctggaagtcatcgaaaag
atctggccggacctcttgaaaaaggtagggccgagcctgtcctggcgcctgagccaggcc
cagccaatcggcgtcgacgagccgggtgtgctggtcatcgcggccaagccggggtacaat
tcagtcgccgacccctgcgggaccgatgaggcccgaagccggatcgcggaatgcctccag
tggctcctccagaggcccctgaaggtccgctacgaatcgtcgcaagtcggggaagccccg
gccgatgcacccgagagcggcccccgacggcttgagcagctcatgagcgaccccctgatc
cagaaggtcgtggaactcttcgaggcccgggtgagccacttcgagcccgagacccggcgt
gacggcgacgaggccgcgacgcccgatcactga
DBGET
integrated database retrieval system