Planctomyces sp. SH-PL62: VT85_08100
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Entry
VT85_08100 CDS
T04401
Symbol
sigA_5
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT85_08100 (sigA_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plh03021
]
VT85_08100 (sigA_5)
Transcription machinery [BR:
plh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT85_08100 (sigA_5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AMV37381
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All DBs
Position
2116801..2117820
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AA seq
339 aa
AA seq
DB search
MFSSSVEVASETSPPASGRRSTAQSSAILTAEREQELAARIQAGDPKAREELIVANLRLV
RSIAAEFRARNRAIDLDDLIQEGNIGLMRAVRDFDPEAHGTRFVTYASCWIRHHIQRVLA
EQSSLIRFPYYVVVLRRRFEKVRAQMVEALRAAPASVDPMEPSMEEVAERMGVAPRRLKH
LRNAQVDLRSYSTTSLDDDESQDDALSQLLPPESPLEIAETMERLHAAMRRLTLLEAWVL
RRRYRLDDSTEEVVDEAASRVRRRGAEARRPGPRTGGRRTYRELSHEIGKPIHQLRQVER
AAIVKLHEILDGAVAAEGEVLEAPANPRRHAPAPARRSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgttctcttcgtccgtcgaagtcgcgtccgaaacgtcgcctcccgcctcgggccgccgt
tcaaccgcccagtcctcggcgatcctgaccgccgagcgggagcaggaactggccgcaagg
atccaggccggcgacccgaaggcccgcgaggagttgatcgtcgccaaccttcgcctggtc
cggagcatcgccgccgagttccgggctcggaaccgcgcgatcgaccttgacgacttgatt
caggaggggaacatcggtctcatgcgggccgtccgcgacttcgaccccgaggcccacggc
acccgcttcgtgacctacgcctcctgctggatccgccaccatatccagcgcgtgctggcc
gagcagtcctcgctgatccgcttcccgtactacgtcgtagtcctccgtcgacggttcgag
aaggtcagggcgcaaatggtcgaggcccttcgcgccgcgccggcctcggtcgatcctatg
gagcccagcatggaggaagtggccgagcggatgggcgtcgcgccccggcgtctgaagcac
ctgcgcaacgcccaagtcgacctccgctcctattccacgacctcgctcgacgacgatgaa
tcgcaggacgacgccctctcccaattgctcccgcccgagagcccgctggaaatcgccgag
acgatggagcggctgcacgccgcgatgcgccggctgaccctgctggaagcctgggtcctc
cgccgccgctatcgcttggacgattcgaccgaggaagtcgtggacgaggccgcgtcccgc
gtccggcgccgaggtgccgaggcgcgacgccccggcccccgcaccggaggacgccggacg
taccgcgaactctcccacgaaatcggcaagcccatccatcaactccgccaggtcgaacgc
gccgccatcgtcaaactccacgagattctcgacggggccgtcgcggcggagggcgaggtc
ctggaagcccccgcaaaccctcgccgacacgcgcccgcgccggcccgccgctctgcctga
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