KEGG   Planctomyces sp. SH-PL62: VT85_08475
Entry
VT85_08475        CDS       T04401                                 
Name
(GenBank) 2',5' RNA ligase family
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
plh  Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:plh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plh03016]
    VT85_08475
Enzymes [BR:plh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     VT85_08475
Transfer RNA biogenesis [BR:plh03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    VT85_08475
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL Corona_NS2A
Other DBs
NCBI-ProteinID: AMV37456
UniProt: A0A142YE13
LinkDB
Position
complement(2210977..2211654)
AA seq 225 aa
MMRGTPNDDADGKGSDDAMAQTTRTFLAIDVPSPVAERLAKLQTRLSPLLPEFRWNDAAP
FHMTLAFLGDVPFTELKDVCDAAVKAARACKRFEVRIAGLGAFPKPERPRVIWAGFDGPG
LEPLAALHKAVVSNLRKVGRQPEDVRFSPHVTLGRLRTGRDKRPTSTTIPAADLTEILEQ
FREWTAGEFTVGEVVAYSSTLTPEGPTHAPLVRGGLASAKPRPET
NT seq 678 nt   +upstreamnt  +downstreamnt
atgatgcgcgggaccccgaacgacgatgccgatgggaaaggatccgacgacgcgatggcc
cagacgacccggacgttcctcgcgatcgacgtgccctccccggtcgccgagcggctggcc
aagctccagacgaggctctccccgctcctgcccgagtttcgctggaacgacgcggcgccg
ttccacatgacgctcgccttcctgggcgacgtcccgttcaccgagctgaaggacgtctgc
gacgccgcggtcaaggccgcgcgggcgtgcaaacgcttcgaagtgaggatcgccggcctg
ggtgccttccccaagcccgagcggccccgcgtcatctgggcgggcttcgacggtcccggc
ctcgaacccctcgccgccttgcacaaggccgtcgtctccaacctccgcaaggtgggccgc
cagcccgaggacgtgcgattcagccctcacgtcaccctgggaaggctccggaccggccgc
gacaagcgaccgacctcgaccaccatccccgccgccgatctgacggagatcctggagcaa
ttccgcgaatggacggccggcgaattcaccgtcggcgaggtcgtcgcctactcctccacg
ctcaccccggaaggccccacccacgccccgctcgtccgcggcggcctggcctcggcgaaa
ccccgccccgagacttga

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