Planctomyces sp. SH-PL62: VT85_09530
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Entry
VT85_09530 CDS
T04401
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plh03021
]
VT85_09530
03009 Ribosome biogenesis [BR:
plh03009
]
VT85_09530
Transcription machinery [BR:
plh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VT85_09530
Ribosome biogenesis [BR:
plh03009
]
Prokaryotic type
rRNA transcription factors
VT85_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
HHH_5
S1
KH_NusA_C
KH_2
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AMV37665
UniProt:
A0A142YER7
LinkDB
All DBs
Position
2469326..2471038
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AA seq
570 aa
AA seq
DB search
MSVDLVRIVDSIHRDKNISKEILFDGIQSALATAARKHYPDAGDIEVRIDRDSGAIEATK
DGVRMDPAELGRISAQTAKQVIIQKIREAERDSLFDEFEDQRGDLMTGTVQRFEGGAVIV
NLGKTDAILPRGEQIPGESYHPSERIRAIILDVRKVGQRVKIILSRTHPDFVRRLFELEI
PEIADSTIAIRALAREAGYRSKVAVTSIDAKIDAVGACVGVRGTRIKNIVDELGGERIDI
VRWNESLQVLIPNSLQPAEIDEVMLCHLLGRAIVLVRDDQLSLAIGRRGQNVRLASKLVG
WDVEIMTAEELDEVIEKAVGSFSKIEGVDVELAERLVEQGILSYDDLSVMEIVDLVNTID
GLDEDLAASIVSQAEQMAEEQTDDLPRRKSGRNAAALADDHGGAPAPTAEAPEAGPAEGE
GEGETEGQAIDAGGEEDWNETETEEEGGPRGGPEDEFDPESTGDRESALPAELRGAIDSD
PPYDDEDPDAETDGDESIEGAERRDVALAEETGGLTTNGREVTSAPDDAEQSETLRLVMN
VVEGDDPPVLDEDPGRDPKVAETADDDEES
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgatctggtccgcatcgtcgatagcatccatcgggacaagaacatctccaag
gagatcttgttcgacgggatccagtcggcgctcgccaccgcggcgcggaagcactacccg
gacgccggcgacatcgaggtccgcatcgaccgcgacagcggggccatcgaggccaccaag
gacggcgtccggatggaccccgccgagctgggccggatctccgcccagaccgccaagcag
gtcatcatccagaagatccgcgaggccgagcgcgacagcctgttcgacgagttcgaggac
cagcgcggcgacctgatgacggggaccgtccagcggttcgaaggcggcgcggtcatcgtc
aacctgggcaagaccgacgccatcctcccccgcggcgagcagatccccggcgagagctac
caccccagcgagcggatccgggccatcatcctggacgtccgcaaggtgggccagcgggtc
aagatcatcctcagccgcacccaccccgacttcgtccgccggctgttcgagctggagatc
cccgagatcgccgactcgaccatcgccatccgcgccctggcccgcgaggccggctaccgc
tccaaggtggccgtgacctcgatcgacgccaagatcgacgccgtcggcgcctgcgtcggc
gtccgggggacccggatcaagaacatcgtcgacgagctggggggcgagcggatcgacatc
gtccgctggaacgagtcgctccaggtcctgatccccaactccttgcagccggccgagatc
gacgaggtcatgctctgccacctgctgggccgggccatcgtcctggtgcgcgacgaccag
ctctcgctggcgatcggccgccggggccagaacgtccgcctggcgtcgaagctggtgggc
tgggacgtcgagatcatgacggccgaggagctcgacgaggtgatcgagaaggccgtcggc
tcgttctccaagatcgagggggtcgacgtcgagctggccgagcggctggtcgagcagggg
atcctcagctacgacgacctgtcggtgatggagatcgtcgacctggtcaacaccatcgac
ggcctcgacgaggacctcgccgcttccatcgtctcccaggccgagcagatggccgaggag
cagaccgacgacctcccgcgacgcaagtcgggccgcaacgccgccgccctggccgacgac
cacggcggagcccccgccccgacggccgaggcccccgaagccggaccggccgaaggtgag
ggcgagggcgaaaccgaaggccaggcgatcgacgccggcggcgaagaagactggaacgag
accgagaccgaagaggaagggggcccgcgcggcgggccagaggacgagttcgatccggaa
tcgaccggcgaccgggagtcggccttgcccgccgaactccgcggcgcgatcgattccgac
cccccttacgatgacgaggacccggacgccgagacggacggggacgagtcgatcgagggg
gccgagcggcgtgacgtggccctcgccgaggagaccggcgggctgaccacgaacggccgc
gaggtgacctcggcgccggacgacgccgagcagtcggagaccctccggctggtgatgaac
gtggtcgagggggacgaccccccggtcctcgacgaggaccccggtcgcgacccgaaggtc
gccgagaccgccgacgacgacgaggagtcctga
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