Planctomyces sp. SH-PL62: VT85_13180
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Entry
VT85_13180 CDS
T04401
Symbol
kdpD
Name
(GenBank) Sensor protein KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VT85_13180 (kdpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plh01001
]
VT85_13180 (kdpD)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plh02022
]
VT85_13180 (kdpD)
Enzymes [BR:
plh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VT85_13180 (kdpD)
Protein kinases [BR:
plh01001
]
Histidine kinases
OmpR family
VT85_13180 (kdpD)
Two-component system [BR:
plh02022
]
OmpR family
KdpD-KdpE (potassium transport)
VT85_13180 (kdpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
Usp
GAF_2
HATPase_c_2
GAF
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMV38384
UniProt:
A0A142YGV1
LinkDB
All DBs
Position
complement(3364255..3366951)
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AA seq
898 aa
AA seq
DB search
MIDQRPNPDALLGQVQAEEARRGRGALKIFFGYAAGVGKTYAMLEAARRAAASGREVVVG
YVEPHGRPETLTLLEGLEAIPPHLVEYRGVTLREFDVDAALARRPELILVDELAHHNAEG
SRHTKRWQDVEELLGAGINVWTTLNVQHLDSLNDVIGGVTGVTVRETIPDRVFERADDLE
LVDITPEELLERLRAGKVYIPEQAERALAGFFQKSNLVALREFSLRQAARRVQTDVESAR
RQRSASEPWATADRLLVCVGPSPSTARVLRTAKRMAQALDAPWTAAAVERMDMAADPLVQ
VRLADHYRLAERLGAEVVTLSGRSVAPALLDYARTRNVTKILIGKTEQPRWKRLLSGSIV
DELLERSGDIDVYVVRGEGDPARSSRTRPPAAPADRRPYLKAAAIVGAGTAAAALVDRIG
LHSANVAMVFLAAVALVAAVCGRAPSILASVVAVLVFDIGFVPPRYTFAVADTEYLVTFG
VMLAIALLISTLTARLRSQVESGTLRERRITALYELGKQLSSISGAAFLAAAAARKVAEL
TNGEVAIYLGEPGGVPEVAFGRGSAVAAHPVSDPTARWVMEHDQMAGAGTDTLPNAVALF
VPLTASQQTVGALAVKAEPIGRLLEPDQRRLLEACAGQLALAIERDRMSLAASEALVQAQ
AEQVRNTLLSGVSHDLRTPLAAIAGASTGLLQTDTFDESTRRQLLETIADEANRLTRLLE
DILQMSRLEMGGATARMQWNILEEVVGSALGRTRCELGDRRVEVSIPGDLPLLLVDGLLL
EQLFVNLLENAARYTPPQAVVSITARPEAGWVIINVADDGPGLPPGSEERIFEKFRRGDP
HADAGRGSGLGLAICRAVAKVHGGEITAANRPDGGVRFTLRLPLPQDPPQIEIESSGD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcagcgccccaaccccgacgccctacttgggcaggtccaggccgaggaggcc
cggcggggccggggtgcgctcaagatcttcttcggctatgcggcgggggtggggaagacc
tacgccatgctggaggccgcccggcgggcggctgcatccggcagggaggtggtcgtcggc
tacgtcgagccgcacggcaggccggagaccctgacgctcctggaggggctggaggcgatc
ccgccacacctggtcgagtaccgtggggtgaccctgcgggagttcgatgtggatgcggcg
ctcgcccgccggcccgagctgatcctggtcgatgagctggcccaccacaacgccgagggc
tcccgtcacacgaagcgatggcaggacgtggaggagttgcttggggcggggatcaacgtc
tggacgacgctcaacgtccagcacctcgacagcctcaacgacgtgatcggcggcgtcacc
ggcgtcaccgtgcgagagacgatccccgatcgggtcttcgagcgggccgatgatttggag
ctggtggacatcacgcccgaggagctgctcgaacgccttcgggcgggcaaggtctacatc
ccggagcaggccgagcgggcgttggcgggcttcttccagaagtcgaatctcgtggcattg
cgagagttctctctgaggcaggcggcccggcgggtccaaaccgatgtggagtccgcccgg
cggcagcggtcggcctccgagccgtgggcgacggccgacaggctgctcgtctgcgtcggc
cccagcccctccacggctcgagtgctccgaacggccaagcggatggcccaggccctcgac
gccccctggacggcggcggccgtcgagcgcatggacatggccgccgacccgctggtccag
gtccggctggccgaccactaccgtcttgccgagcggctcggggcggaggtcgtcacgctg
tcgggccgatccgtcgcccccgctttgctcgattacgcccgcacccggaacgtcaccaag
atcctcatcggcaagaccgaacagccccgctggaagcggctcctgtccggttcgatcgtg
gatgaattgctcgaacgcagcggcgacatcgacgtgtacgtcgtccggggagagggcgac
ccggcccgctcgtcccggactcgaccgcccgccgccccggccgatcggcggccttatctc
aaggcggctgcgatcgtgggcgccggcacggcggcggcggccctggtcgatcggatcggg
ctgcactcggccaacgtcgccatggtgttcctcgccgccgtcgccctcgtggcggccgtc
tgcgggcgggcgccctcgatcctggcgagcgtcgtggccgtcctggtcttcgacatcggg
ttcgtcccgccccgctacacattcgccgtggccgacacggaatacctcgtgacgttcggc
gtcatgctcgccatcgccctgttgatcagcaccctcaccgcccggctcagatctcaggtc
gagagcgggactcttcgagagcgccgcatcacggcgctctacgagctgggcaagcaactc
agctcgatctcgggggcggccttcctggcggcggcggcggcccgcaaggtcgccgagctg
acgaacggggaggtggcgatctatctcggcgaacccggcggcgtgccggaggtcgccttc
ggccggggctcggccgtcgccgcccacccggtgagcgacccgacggcccgatgggtcatg
gagcatgaccagatggcgggggcggggaccgacacgctccccaacgccgtcgccctgttc
gtgccgctgacggcctcgcaacagacagtcggagcgctggccgtgaaggccgaaccaatc
gggcggctgctggagcccgaccagaggcggctgctggaggcgtgcgccggccagctcgcc
ctggcgatcgagcgagaccggatgtcgctcgcggcctcggaggccctggtccaggcccag
gccgagcaggtccgcaacaccctgctgagcggcgtctcccacgacctgcggacgccgctc
gccgccatcgccggggccagcaccggcctgctccaaaccgacacgttcgacgagtcgacc
cgacgccaactgctggagacgatcgccgacgaggctaaccgcctgacccggctcctggag
gacatcctccagatgtcgaggctggaaatgggcggggcgaccgcccggatgcaatggaac
atcctggaggaggtcgtgggatcggcactcggccgcacccggtgcgagttgggcgatcga
cgggtcgaggtgtcgatccccggcgacctgcccctgctgctggtggacggcctgcttctg
gaacagttgttcgtcaacctgctggagaacgccgcccgctatacgcccccgcaagcggtc
gtctccatcacggcgaggcccgaggcaggttgggtgatcatcaacgtcgccgacgacggc
cccggcttgcctccgggttccgaggagcggatcttcgagaaattccgccgtggcgatccc
cacgccgacgccgggcgtggcagcgggctgggcctggcgatctgccgagccgtggcgaag
gtccacggtggggagatcacggctgcgaatcgacccgacggtggggtgcgtttcaccctg
cggctccccctcccgcaagatcccccgcagatcgaaatcgaatcgagcggggactga
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