Planctomyces sp. SH-PL62: VT85_15925
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Entry
VT85_15925 CDS
T04401
Symbol
miaB_2
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plh03016
]
VT85_15925 (miaB_2)
Enzymes [BR:
plh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VT85_15925 (miaB_2)
Transfer RNA biogenesis [BR:
plh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VT85_15925 (miaB_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AMV38924
UniProt:
A0A142YIE5
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All DBs
Position
complement(4042265..4043695)
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AA seq
476 aa
AA seq
DB search
MADQPTSQSKKLYIETVGCQMNVLDSELVVARLRDDGYELTDDIDQADAILYNTCSVRQH
AEDKIYSALGRIKHLKRRKPDLAVGVLGCMAQKDQGQILRRAPHVDVVIGPGQLGLVPEL
IAKAKAEASPQLAVSLARNAGSREHVTSSFDSYDADREPAVRPSPFQAYLRVMMGCDKFC
TYCIVPSVRGPEQSRPPSAIVAEARLLAMQGVKEITLIGQTVNSYKHKEADGRITRLSDL
LAQLHDVEGFERIKFITNFPNDMTDDLLQAVRDLPKVSRYIHVPAQSGCDLVLKRMKRMY
TAAFYEDMLARLRETIPGSSVSSDFIVGFCGETEESFEKTVGLLERSRFKNSFIFKYSPR
TGTKADDLFPDDVPEEVKRRRNHVLLDLQTAISLEDNRAFIGRETTVLVEGRSRSTTRKE
GWDGGDQLTGRTHCDRIVVFDGPEELTGRMARVQIENASAVTLFGRIAQNQAASPI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagccgacctcgcagtcgaagaagctctacatcgagaccgtcggttgtcag
atgaacgtgctcgacagcgagctcgtcgtcgcccgtctgcgcgacgacggctacgaactg
accgacgacatcgaccaggccgacgccattctctacaacacctgctcggtccgccagcac
gccgaggataagatctacagcgccctgggccggatcaagcacctcaagcgcaggaagccc
gacctggcggtcggagtcctgggctgcatggcccagaaggaccagggccagatcctccgc
cgggccccgcacgtcgacgtggtgatcggccccggccagctcggcctggtcccggagctg
atcgccaaggccaaggccgaagcctcgccccagctcgccgtcagcctggcgcggaacgcc
ggcagccgggagcacgtcacgtcgagcttcgacagctacgacgccgaccgcgagcccgcc
gtccgccccagcccgttccaggcctacctccgggtcatgatggggtgcgacaagttctgc
acctactgcatcgtcccgtcggtccgcggcccggagcagagccgcccgccgtcggcgatc
gtcgccgaggcccgcctgctcgccatgcagggggtcaaggagatcaccctcatcggccag
acggtcaacagctacaagcacaaggaggccgacggccgcatcacccggctctccgacctg
ctcgcccagcttcacgacgtcgagggcttcgagcggatcaagttcatcaccaacttcccc
aacgacatgaccgacgacctgctgcaggccgtccgggatctccccaaggtctcgcgctac
atccacgtcccggcgcagagcgggtgcgacctcgtcctcaagcggatgaagcggatgtat
acggccgccttctacgaggacatgctggcccggctccgggagaccatccccggctcgtcc
gtctccagcgacttcatcgtcggcttctgcggagagaccgaagagtcgttcgagaagacc
gtcggcctgctggaacgctcccggttcaagaacagcttcatcttcaagtacagcccccgc
accggcaccaaggccgacgacctgttcccggacgacgtgccggaggaagtcaagcgccgt
cgcaaccacgtcctgctggatctccagacggcgatcagcctggaggacaaccgggcgttc
atcggccgggagacgacggtcctcgtcgagggccgaagccggtcgacgacccgcaaggaa
ggctgggacggcggcgaccagttgaccgggcggacccactgcgaccggatcgtcgtgttc
gacggccccgaggagctcaccggccgcatggcgcgggtccagatcgagaacgcaagcgcc
gtgaccctcttcggtcgcatcgcccagaaccaagccgcgagtccgatttga
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