Planctomyces sp. SH-PL62: VT85_16345
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Entry
VT85_16345 CDS
T04401
Symbol
yknX
Name
(GenBank) Putative efflux system component YknX
KO
K02005
HlyD family secretion protein
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VT85_16345 (yknX)
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Motif
Pfam:
CzcB_C
Beta-barrel_YknX
Beta-barrel_RND_2
Beta-barrel_AprE
YknX_C
Motif
Other DBs
NCBI-ProteinID:
AMV39008
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Position
4156421..4158271
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AA seq
616 aa
AA seq
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MQNNLNALPRIELERPSRRGLVGLRLVGLVVALSAVGGAAWAWEQGYRPTWLDRRQEVSF
HLAEVDRGDIVQYVVEFGTIESAADGVVRCQVEALVGMVGGTNSSGSGGSGGRGGSTSGS
QSRAAQVSTPAPAVKKSTGSASAKSATGSASKSGSGSASASTPVVSTSGKPTIRSFSYVV
TPYSPLKRTASASSATTSSSSGSRGGGGGGGMGDEKPGSTRIISILPEGTAVKKGDVVCE
LDSAAFRDELKAQQIRWLQAKSYVEQATSLLAVNQITLKEYREGILPQDIQLIRQYVQTC
EIEQDRAMRNLEWSRGVTAKGLRTSSQLRADELSLQQSEFVLSEAKGMLERLEKYTGPKI
LKSLEAKLASILTDKLAQDASFALEAERLQRLEKNVAACTLRATRDGVVVYINQTNAWGR
VESVIQEGTTVRQDQPIFQLPDPKRMRIKARINETKVAMLRNGQACSIRLDAFPDRLLSG
RVTDVTAISSPVNGPFSDVRVYFALIAIEDAFDGIRPGLSAEVTFLYDRRSQVDRLPLAA
VRDIGDDSFVAVLESQPAPDAKVPYRWQKVELGLSDSDFVEVLSGVREGEQVILDPFTLE
APQVEPTPSRIASTSP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaatctcaacgccctcccgcggatcgaactggaacgcccgagtcgacgtggc
ctggtcggtctgcgactggtgggcctggtcgtcgccctctcggcggtcggcggggcggcg
tgggcgtgggagcagggatatcggcccacctggctcgatcgtcggcaggaggtctcgttc
cacctggccgaggtcgatcgcggcgacatcgtccagtacgtcgtggaattcgggacgatc
gaaagcgccgcggacggcgtggtgcgctgtcaggtggaagctctggtcgggatggtcggc
ggcaccaactcgagcgggtcgggcggctcgggcggtcgcggcgggtcgacttccggctcc
cagtctcgcgcggcccaggtttcgacgccggcgcctgcggtgaaaaagagcaccggctcg
gcttctgcgaaatcggcgaccggctcggcttcaaagtccggatccggatcggcgtccgcg
tcgaccccggtggtatccacctcgggtaagccgacgatccgaagtttcagctacgtcgtg
accccgtattcgccgttgaagcggacggcctcggcctcgtccgcaacgacgtcgagcagc
agcggatcgcgaggcggtggcggcggcggtggtatgggggacgagaagccgggctcgacc
cggatcatctcgatactccccgaagggactgcggtcaagaaaggggacgtcgtctgcgaa
ctcgactccgcggcgttccgcgacgagttgaaggcgcagcagatccgttggctccaggcc
aagtcgtacgtcgagcaggcgacctcgttgctggccgtgaaccagatcacgctcaaggaa
tatcgcgaggggattcttcctcaggatatccaactcatccgccagtatgttcagacctgc
gagatcgagcaggatcgggcgatgcgcaacctcgagtggtccagaggggtcacggccaag
ggtcttcgcaccagttcccaactccgcgccgacgagttgtcgctgcaacaatcggagttc
gtgctcagcgaggcgaaagggatgctcgaacggctggagaaatacaccggccccaagatc
ctcaagtccctggaagcgaagctcgcctcgatcctgaccgacaaactggcccaggacgcg
agtttcgcgctggaggccgagcggctccagcggttggagaagaacgtcgcggcctgcact
ctccgcgccactcgcgacggcgtggtggtgtacatcaatcagacgaacgcctggggacgc
gtggaatcggtgatccaggaagggacgaccgttcgacaggaccagccgatcttccagctt
cccgatcccaaacggatgcggatcaaggcccgcatcaacgagacgaaggtggcgatgctg
cggaacggccaggcgtgctccatccggctcgacgccttccccgaccgcctgctcagcggc
cgggtgacagatgtgaccgcgatctcctcgccggtgaacggaccgttctccgacgtgcga
gtctacttcgccctgatcgcgatcgaggatgccttcgatgggattcgccccggcctcagc
gccgaggtgacgttcctttacgatcggcgttcgcaggtcgaccgtctgccgctcgcggcc
gtccgggacatcggcgatgactcattcgtcgccgtcctggaaagccagcccgcgcctgac
gccaaggtcccttaccgctggcagaaggtggaactgggcctcagcgactcggacttcgtc
gaggtgctctcgggcgtccgtgagggagaacaggtcatcctcgatcctttcaccctggag
gcgccgcaagtcgagccgactccctcgcgcatcgcctcgacctcgccctga
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