Planctomyces sp. SH-PL62: VT85_16725
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Entry
VT85_16725 CDS
T04401
Symbol
alkA_1
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT85_16725 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_16725 (alkA_1)
Enzymes [BR:
plh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VT85_16725 (alkA_1)
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT85_16725 (alkA_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AMV39084
UniProt:
A0A142YIV5
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All DBs
Position
4246889..4247512
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AA seq
207 aa
AA seq
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MSQKSTVDPWTKAIRHLKKVDPHLKQIIGRVGPCSLSPREDRFGALVGAIVSQQISTKAA
ASISERISELVGRPYDPHRLLELGEDPLRACGLSGSKARYVLNLAAAVVEGATPVDQFDK
GWNDDAIIDALTTVKGIGVWTAHMFLIFALNRPDVLPAGDLGVRVALRDRHGLAELPGPL
DCHALTEHWRPYRSVGSWYLWRSLDVR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaagtcgacggtcgacccctggacgaaggcgattcgccatcttaagaaggtc
gacccgcacctcaaacaaatcatcgggcgtgtgggaccctgcagtctctctcctcgcgag
gatcgcttcggcgccctcgtcggtgcgatcgtctcccagcagatctcgaccaaggcggcg
gcatcgatcagcgagcggatatccgaactggtcggccgcccctacgacccccatcgcctt
ctggagttgggagaggaccccttgcgagcctgcggcctctccgggagcaaggctcgctac
gtcctgaatctggctgcggcggtcgtcgaaggggcgacgcccgtcgaccagttcgacaag
ggatggaacgacgacgcgataatcgacgccctgaccacggtcaagggtatcggcgtctgg
accgcccatatgttcctgatcttcgccctcaaccggccggacgtcctcccggctggagac
cttggcgtccgcgtcgcgctgcgcgaccggcacggtctcgccgagcttcccgggcccttg
gattgccacgccctgacggagcactggcgaccctatcgctcggtcgggtcctggtacttg
tggcggagcctggacgtccgctga
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