KEGG   Planctomyces sp. SH-PL62: VT85_17900
Entry
VT85_17900        CDS       T04401                                 
Symbol
polA_1
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
plh  Planctomyces sp. SH-PL62
Pathway
plh03030  DNA replication
plh03410  Base excision repair
plh03420  Nucleotide excision repair
plh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VT85_17900 (polA_1)
   03410 Base excision repair
    VT85_17900 (polA_1)
   03420 Nucleotide excision repair
    VT85_17900 (polA_1)
   03440 Homologous recombination
    VT85_17900 (polA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plh03032]
    VT85_17900 (polA_1)
   03400 DNA repair and recombination proteins [BR:plh03400]
    VT85_17900 (polA_1)
Enzymes [BR:plh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VT85_17900 (polA_1)
DNA replication proteins [BR:plh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     VT85_17900 (polA_1)
DNA repair and recombination proteins [BR:plh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     VT85_17900 (polA_1)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VT85_17900 (polA_1)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 TraI_hel_assoc_N
Other DBs
NCBI-ProteinID: AMV39315
UniProt: A0A142YJA5
LinkDB
Position
4555595..4558303
AA seq 902 aa
MADRPTFYILDAYSLIFQVFHAIPEMTSPTGGPTNAAFGIFRDVLNLFRDRKPDYIAAAF
DGGGPVFRSEIFADYKSNRPDMPINLVPQIDVIRRIFEGFNVPVLVEPGMEADDVIATLA
RRGEERGLDVFICTSDKDARQLISDHVKILNIRKNTLMDEAALEKEWGIRPGQVVDFLAL
TGDAVDNVPGVPGIGPILASGYLKQFGDLETLLANPDKVKGPKKQQALRDNAEVARRARS
LVALRDDLELALDWNALQASPPNAPVLREICVESGFHRFAADLSDSKETVPDAPKAEWVA
RYSTIDTPESFQTFVQELRKQPRFCIDAETTSINPLLSSLVGIAVSWNAGEGFYIPLRAP
IGFKILDPEMVLDALRPILADPEVEKVGQNLKYDMLAFRRAGVSIEGPITDTMILSYLLE
SGERNHSLDQLSDRLLGHKMIPISDLIGKGKKQLRMDQIDVPRIAEYAGEDADATWRVYE
ILAPRVREEGLWDLYADLERPLVSILMRMEEIGVMVDVHRLKELSDDFAVRLAATEEEIH
KLAGRPFNINSVPQLRQILFEELKLPKLQKTPGGELSTATEVLEELASKHPLPALLVRHR
QLTKLKGTYLDALPLLAHPDDGRIHASFNQGVAATGRLSSSDPNLQNIPVRTEEGRQIRQ
AFVAEGDDQRLLTADYSQIELRVLAHFSQDPALCKAFEADHDIHRAVAARIYGVAEDQVD
DTMRRVAKTVNFGVIYGLSPFGLAGRLGIKQSEAAAFIDAYFQEYQGVDQFITRTLESAQ
ASGRVETILGRRRPIAGIKATTGRNRNLAERTAVNTVIQGSAADLIKRAMILVDRRLREE
RLEARMILQIHDELVFESPVSELPRLAALVREEMTRALSLAVPLKVDLAVGRNWLDVETP
DY
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggccgatcgcccaacgttctatattctcgacgcttactccttgattttccaggtcttc
cacgccatcccagagatgacgagcccgaccggagggcccacgaacgccgccttcgggatc
ttccgggacgtcctcaacctgttccgcgaccgcaagccggactacatcgcggccgccttc
gacggcggggggcccgtcttccggtcggagatcttcgccgactacaagtccaatcggccc
gacatgccgatcaacctcgtcccccagatcgacgtgatccggcgcatcttcgagggattc
aacgtgccggtcctggtcgagcccggcatggaggccgacgacgtcatcgccacgctcgcc
cgacgcggcgaggagcgtgggctcgacgtcttcatctgcacgtccgacaaggacgcccgg
cagttgatcagcgatcacgtcaagatcctcaacatccgcaagaacaccctgatggacgag
gcggcgctggagaaggagtgggggatacggccgggtcaggtcgtcgacttcctggccctc
accggcgacgccgtcgacaacgtacccggcgtcccggggatcggcccgatcctcgcctcg
ggatacctgaaacagttcggcgacctggagacactcctggccaaccccgacaaggtgaaa
ggccccaagaagcagcaagccctccgggacaacgccgaggtggcccgccgggcgcggagc
ctcgtggcccttcgcgacgatctggaactggccctggactggaacgcgctccaggcctcg
cctcccaacgccccggtcctccgggagatctgcgtcgaatcgggtttccaccgcttcgcc
gccgacctgagcgactcaaaggagacggtccccgacgcaccgaaagccgagtgggtcgcg
agatattcgacgatcgacaccccggaatcgttccagactttcgtccaggaattacggaaa
cagccccgattctgcatcgacgccgagacgacctcgatcaatccgctcctgtccagcctc
gtcgggatcgccgtctcctggaacgcgggagagggtttctacatccccttgcgggccccg
atcggcttcaagatcctcgaccccgagatggtcctggacgccctgcggccgatcctcgcg
gacccggaggtcgagaaggtcggccagaacctcaagtatgacatgctggccttccgtcgg
gcgggcgtctcgatcgaggggccgatcaccgacaccatgatcctcagctacctgctcgaa
agcggcgagcgcaaccacagcctggaccagctgtcggaccgcctcctgggccacaagatg
atcccgatctccgatctgatcgggaaggggaagaagcagctcaggatggaccagatcgac
gttccgcgcatcgccgagtacgccggggaggacgccgacgcgacctggcgggtctacgaa
atcctcgccccccgggtccgcgaggagggcctgtgggacctctacgccgacctggagcgc
cccctcgtctcgatcctgatgcggatggaagagatcggcgtcatggtggacgtccaccgg
ctgaaggagctttccgacgacttcgccgtccggctcgcggcaaccgaggaagagatccac
aagctcgccggccgcccgttcaacatcaactccgtgccccaactccgccagatcctcttc
gaagagctgaagctccccaagcttcagaaaacccccggcggagagttgagcaccgcgacc
gaggtcctggaggagctggcgagcaagcaccccctgcccgccctcctggtccggcatcgc
cagctcaccaagctgaaggggacctacctcgacgccctgccgctcctcgcccatcccgac
gacggccggatccacgcgtccttcaatcagggagtggcggccaccggccggctcagctcc
agcgaccccaatctccagaacatccccgtgcggaccgaggaaggccgccagatccgtcag
gcgttcgtggccgagggggacgaccaaaggctcctgacggccgactactcgcagatcgaa
ctccgggtcctcgcccacttctcccaagatccggcgctgtgcaaggccttcgaggccgac
cacgacatccaccgcgccgtcgcggcgaggatctacggcgtggccgaggatcaggtcgac
gacacgatgagacgggtcgcgaagacggtgaacttcggcgtgatctacggcctcagcccg
ttcggcctggccggacgactgggcatcaaacagtccgaggcggcggccttcatcgacgcc
tacttccaggagtatcagggagtcgaccagttcatcacccggacgctcgaatccgcccag
gcttcggggcgtgtcgagacgattttgggccgccgtcggccgatcgcggggatcaaggcg
accaccgggaggaatcggaacctcgccgagcggacggccgtcaacacggtgatccagggg
tccgcggccgacctcatcaagcgggcgatgatcctcgtcgatcgtcggctccgcgaggag
cgcctggaggctcggatgatcctccagatccacgacgaattggtcttcgagagcccggtc
tcggagctgccgcggctggccgcgctggtccgcgaagagatgacgcgggcgctgtcgctg
gcggtgccgctgaaggtcgacctggccgtcgggaggaactggctcgacgtcgagactccc
gactattga

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