Planctomyces sp. SH-PL62: VT85_20150
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Entry
VT85_20150 CDS
T04401
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00061
Fatty acid biosynthesis
plh00540
Lipopolysaccharide biosynthesis
plh01100
Metabolic pathways
plh01212
Fatty acid metabolism
Module
plh_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VT85_20150 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VT85_20150 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
VT85_20150 (lpxC)
01004 Lipid biosynthesis proteins [BR:
plh01004
]
VT85_20150 (lpxC)
Enzymes [BR:
plh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VT85_20150 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
VT85_20150 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
Lipid A
VT85_20150 (lpxC)
Lipid biosynthesis proteins [BR:
plh01004
]
Fatty acid synthase
Component type
VT85_20150 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
PKS_DH_N
4HBT
Motif
Other DBs
NCBI-ProteinID:
AMV39756
UniProt:
A0A142YKQ2
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All DBs
Position
5145607..5146956
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AA seq
449 aa
AA seq
DB search
MLIAKRPQRTLAREAVLSGVGFFHGADVNLRFLPAEPDSGIRFVRTDLPGRPGVAARIDQ
VVPTQRRTAVQDGAAKVEMIEHVMAAFAGMQVDNCTIEIDAPELPGLDGSSRGYVEMIDE
AGVVEQARPRQALSLERSVVVREGDAVLAAHPNSAEGLTLSYHLDYGQASPIGNQSVLLA
VAPDIFRREISPCRTFLLEQEAKALRAAGIGLRASEADVLLFGPDGVVGNALRFPDECAR
HKVLDMVGDLALLGMDLHAFVVAHRSGHHTNALLVRKLIQSIEKDREKDARPRTSPLPIR
DDGTIDIQGILEILPHRYPMLLLDRVVELEPGRRVVGIKNVCANEPFFQGHWPGRPIMPG
VLILEAMAQAAGVLIASTVCRLGRAAVIASVDGVKLRRQVIPGDQLRLEVEAVKIKSAYA
SVRSVARVGDAVAAEARIRFVLIDAPPTA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgccaagcgtccccaacggaccctcgcccgcgaggccgtcctgagcggcgtc
ggcttctttcacggggccgacgtgaacctgcggttcctgccggccgaacccgactccggg
atccggttcgtccgcaccgatctccccggccgcccgggggtggccgcccggatcgaccag
gtcgtcccgacccagcggcgcaccgccgtccaggacggcgccgccaaggtcgagatgatc
gagcacgtcatggccgccttcgcgggcatgcaggtcgacaactgcacgatcgagatcgac
gcccccgaactcccgggcctcgacggatcgagccgaggctacgtcgagatgatcgacgag
gccggcgtcgtcgagcaggcccgcccccggcaggccctgtcgctggagcggtcggtcgtc
gtccgcgagggggacgccgtcctcgcggcgcatcccaactcggccgagggcttgacgctc
tcgtatcacctcgactacggccaggcgtccccgatcggcaaccagagcgtcctgctggcg
gtggcccccgacatcttccgccgggaaatctccccctgccgcaccttcctcctggagcag
gaggccaaggcgcttcgagcggccggaatcgggctccgagccagtgaggccgacgtcctg
ctgttcggccccgacggggtcgtcgggaacgccctgcggttccccgacgagtgcgcgcgg
cacaaggtcctcgacatggtgggcgacctcgccctcctgggtatggacctgcacgccttc
gtcgtcgcccaccgctccgggcaccacaccaacgccctgctcgtccgcaagctgatccag
tcgatcgagaaggatcgcgagaaggacgcccggccccggaccagtcccctccccatccgc
gacgacggcacgatcgacatccagggcatcctggagatcctcccgcaccgttacccgatg
ctcctgctggaccgcgtcgtcgagctggagcccggccgccgggtggtggggatcaagaat
gtctgcgccaacgagcccttctttcaaggtcactggcccggccggccgatcatgccgggt
gtgctcatcctcgaagcgatggcccaggccgccggcgtcttgatcgcctcgaccgtgtgc
cgactggggagggccgcggtgatcgcctcggtcgacggcgtgaagctgcgacgccaggtg
atccccggcgatcagctccgtctggaggtggaagcggtgaagatcaagtcggcctacgcc
agcgtccgaagcgtcgcccgggtcggcgacgccgtggccgccgaggcgaggatccgtttc
gtgttgatcgacgcccccccgaccgcctga
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