Planctomyces sp. SH-PL62: VT85_20205
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Entry
VT85_20205 CDS
T04401
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03030
DNA replication
plh03430
Mismatch repair
plh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT85_20205
03430 Mismatch repair
VT85_20205
03440 Homologous recombination
VT85_20205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plh03032
]
VT85_20205
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_20205
Enzymes [BR:
plh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT85_20205
DNA replication proteins [BR:
plh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT85_20205
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT85_20205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF7966
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AMV39767
LinkDB
All DBs
Position
complement(5158387..5159391)
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AA seq
334 aa
AA seq
DB search
MRGLDWLKDGSGKGASPLYVVFGDDPYLRREAIKRAIGVELSDDDDEMGVARFEGASAKL
ADVVDELRTLPFFSKRRVVLVEEADPFVSAYRKELEAYVEAPSSSGSLILAVRSWPGNTR
LAKSAAKAGMAIDCSSPPEADLLRWLPGCASKAQSKLGPDAAKLLLELVGPELGILTAEV
DKLAIATAHVGEIRREDVAKFVEAGRIEEVWDVVNAATEGRGDVAARLLDDLIAKGEHPV
KLLAQMTSSLMRLHHAGRLRAARLSVAEACEIAGIRPFAVQQTTRQHSHLGPGRVDQLPA
WLLQADLDVKGGSQLNPRVVLERLLVRLSQPRRD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcctggactggttgaaggatgggtcggggaagggggcctcgcccctgtacgtg
gtcttcggcgacgatccgtacctccgtcgcgaggccatcaagcgggcgatcggcgtcgag
ctttcggacgacgacgacgagatgggggtcgcccggttcgagggggcgtccgccaagctg
gcggacgtggtcgacgagttgcgtacgctgccgttcttctcgaagcgtcgggtcgttctg
gtcgaggaggccgacccgttcgtctccgcctatcgcaaggagctggaggcgtacgtcgag
gcccccagctcgtccgggagcctgatcctggcggtccgttcctggccgggcaatacgagg
ctggccaagtcggcggccaaggcggggatggcgatcgactgctccagcccgcccgaggcc
gacctgctccgatggctacccggatgcgcatcgaaggcccagtccaaactcgggcccgac
gcggccaagctgctgctggaactcgtcggcccggagctggggatcctgaccgccgaggtc
gacaagctggcgatcgcgacggcccacgtcggcgagatccgccgcgaagacgtggcgaag
ttcgtggaggccggacggatcgaggaggtctgggacgtcgtcaacgccgccaccgagggg
aggggcgacgtcgcggcccggctcctggacgacctgatcgccaagggggaacacccggtc
aagctcctggcccagatgacctcctcgctgatgcggctccaccacgccgggaggctgcgc
gcggcccggctgagcgtcgccgaggcctgcgagatcgccggcatccgccccttcgccgtc
cagcagaccacccggcagcactcccacctcggccccggccgcgtcgatcaactccccgcc
tggctcctccaggccgacctcgacgtcaagggggggagccagctcaatccccgggtcgtc
ctggagcggctcctcgtccgcctctcgcagccgcgacgagattga
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