Planctomyces sp. SH-PL62: VT85_20535
Help
Entry
VT85_20535 CDS
T04401
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein RfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00540
Lipopolysaccharide biosynthesis
plh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VT85_20535 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
VT85_20535 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
plh01005
]
Core region
VT85_20535 (rfaG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_2
GT4-conflict
Glyco_trans_4_2
RRM_8
Motif
Other DBs
NCBI-ProteinID:
AMV39831
UniProt:
A0A142YKV1
LinkDB
All DBs
Position
complement(5239069..5240319)
Genome browser
AA seq
416 aa
AA seq
DB search
MRLALNFPRVDPTKGGAETYIVDLCRSLTRSGHQVDLFTSSWAEGALPAEVRCIRVESPG
RTRREQVAGFAEASARLLKNADYDCTIGFINTYEHDVIIPQGGVHRGSLRANSLRFGNAL
TRRLYVMGKVLNPKFWTYRAIEKRQYAADRGARVVAASRMVARHVQEFEGVPKSRIHVVP
NAIDPDRVLVPQPGALRCVFRDRIGLAPDDLVGLFVGHNYALKGLEPLIRGLAARNKPGV
RPIHLLICGGGRPGWYRRLAQRLGVGEFVHFLGFHDDVRECYWSSDFFISPTYYDPCSLV
VLEALACGLPAVTTACNGASELMDHGRQGFVLSAPDARDELVAALDGMADESRRRAMSIE
AAKLGREWTFDRHVEALVKVFREVAAARAKSATHGRRPASGPHAAKVGNRKKAGRG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggccctgaactttccgagagtcgatcccacgaaaggcggggccgagacctac
atcgtcgacctctgccgcagtctcacgcgctcgggtcaccaggtcgacctgttcacgtcg
agctgggccgagggggcgttgccggccgaggtccgctgcatccgggtcgagtcgccgggc
cgcacccgccgcgagcaggtcgccggcttcgccgaggcgtcggccaggctcctcaagaac
gccgattacgactgcaccatcgggttcatcaacacctacgagcacgacgtcatcatcccc
caggggggcgtgcaccgcggcagcctgcgggcgaattcgctgcggttcggcaacgccctg
acccggcggctctacgtcatggggaaggtgctgaatcccaagttctggacctaccgcgcg
atcgagaaacggcagtacgccgccgaccgcggggcgcgggtcgtcgcggccagccggatg
gtggcccggcacgtccaggaattcgagggggttccgaagtcgcggatccacgtcgtcccc
aacgcgatcgaccccgaccgggtcctggtgccgcagccgggggccttgcggtgcgtcttt
cgggaccggatcggcctggcgccggacgacctcgtcggcctgttcgtgggccacaactac
gcgctcaaggggctggaaccgttgatccgagggctggccgcccggaacaagcccggcgtc
cggccgatccacctgctcatctgcggcggcggccgtccgggctggtatcgccgacttgcg
caacggctgggggtgggggagttcgtccacttcctgggcttccacgacgacgtccgcgag
tgctactggtcgagcgacttcttcatctcgcccacctactacgacccttgctcgctcgtc
gtgctggaggcgctcgcctgcggcttgccggccgtcacgaccgcgtgcaacggggccagt
gagctgatggaccacggccggcagggattcgtgctgtcggccccggacgcccgcgacgaa
ctggtcgccgcgcttgacgggatggccgacgagtcccgccgccgcgcgatgtcgatcgaa
gcggcgaagctcggccgcgagtggacgttcgaccgccacgtcgaggcgctggtgaaggta
ttccgcgaggtcgccgccgccagggcgaaatccgcgacccacggcaggaggcccgcttcc
gggccgcacgccgcgaaggtcgggaatcggaagaaggccgggcggggatga
DBGET
integrated database retrieval system
