Planctomyces sp. SH-PL62: VT85_20670
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Entry
VT85_20670 CDS
T04401
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plh03032
]
VT85_20670 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_20670 (gyrA_1)
Enzymes [BR:
plh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VT85_20670 (gyrA_1)
DNA replication proteins [BR:
plh03032
]
Prokaryotic type
DNA Topoisomerases
VT85_20670 (gyrA_1)
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VT85_20670 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMV39858
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Position
5270882..5273401
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AA seq
839 aa
AA seq
DB search
MAKRNRRGNNDRELRARRSSLTEDVPLAEAARERYLNYALSVITSRALPDVRDGLKPVQR
RILYAMWSDLRITADGRFMKCAAVVGEVMKNYHPHGDSSIYDALVRMAQPFSLRQPLIEG
YGNFGSIDGDPPAAFRYTECRLTPIAQTLLSELREQTVDFRDNYMATTQEPVVLPAQFPN
LLVNGAAGIAVGMATNIPPHNLKEVCNALVVLLENREAPLDKLTRHVLGPDFPTGGVILN
PPEDIRKIYATGQGSLKLRGTFARPEDRPNTIVIDSIPYGIEKDPLVARIGELIGKGAVP
QLTNVKDLSTDDIRIVLELKPGSNADAAMAYLFKNTPLQVNYGVNLTCLLPAEGAAVAVP
SRLDLKTILQHFLDFRLDVVTRRLNYELRLLLARIHILEGFAIVFNNLDEAIRIIRASDG
KADAAPKLIARFGLSDLQADAILETKLYRLGKLEIQDILAELAAKRTRAAEIQGLLDDEP
ARWAIIKAELKHIVKTYGDERRTRIEAPAAPMEFREEDYIVDEDAWVIITREGWTKRQKS
FTDVASIRVRDGDQVGWVYRARARQTITLFTDRGVGYTLRVNDIPMTTGHGDPIQKQFAF
EDQERLVGVVCHDPRCIPDFARFSQSPARMVQRTLDAEADGAAVNGDGHADGSLNGHAGG
PSMPPPPYVVALTAGGKILRFPLATLAPVSTKKGRLVARLDPTLKGDSVVGVEATDGSEN
VCLATKQARVLIFPVTEANVVSAAARGVAAIKLDAKDQVIGFVLANKKREGLAVRTNRGA
EQIVRATKYPVTGRGGRGYAILQRGSLECLVPGEAEPVPHPDQVAEAGDLRPKSDDPRD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacggaaccgccgggggaataacgatcgcgagcttcgcgcgaggcgaagctcg
ctgacggaggatgtcccgctggcggaggccgcgcgggagcgttatctcaactacgccctg
agcgtcatcacctcgcgcgccttgccggacgtccgagacggtctcaagcccgtgcagcgg
cggatcttgtacgccatgtggtcggacctgcggatcaccgccgacggccggttcatgaag
tgcgcggcggtcgtcggcgaggtgatgaagaattaccatccccacggcgactcatcgatt
tacgacgccctggtccgcatggcccagccgttctcattgcggcagcccttgatcgagggc
tacggcaacttcggttcgatcgacggcgacccgccggccgcattccggtacacggaatgc
cgcctgaccccgatcgcccagaccttgctgagcgagcttcgcgagcagaccgtcgacttc
cgcgacaactacatggcgacgacccaggagccggtcgtcctccccgcccagttcccgaac
ctgctggtcaacggcgctgcgggcatcgcggtcggcatggcgacgaacatcccgccgcac
aacctcaaagaggtctgcaacgcgctggtggtcttgctggagaaccgcgaggccccgctg
gacaagttgacccggcacgtcctgggtccggacttcccgaccggcggcgtcatcctcaac
cctcccgaggacatccggaagatctacgccaccggacaggggagcctcaagctccggggg
accttcgcccgtcccgaggatcggcccaacacgatcgtcatcgactcgatcccctacggc
atcgaaaaggacccgctcgtcgcccggatcggcgagctgatcggcaagggggcggtcccc
cagctcaccaacgtcaaggacctgagcaccgacgacatccgcatcgtcctggagctgaag
ccgggctcgaacgccgacgcggcgatggcctatctcttcaaaaatacgccgctccaggtg
aattacggcgtcaacctgacgtgcctgctccccgccgagggggccgcggtggccgtcccc
agccgcctcgacctgaagacgatcctccagcacttcctcgacttccggttggacgtcgtg
acgcggcggctcaactacgagctgcgtctgctgctggcgaggatccacatcctcgaaggc
ttcgcgatcgtcttcaacaatcttgacgaagcgatccggatcatccgcgccagcgacggc
aaggccgacgccgcccccaagctgatcgcccgcttcggcctgagcgacctccaggccgac
gcgatcctggagaccaagctctaccgcctgggcaagctggagatccaggacatcctcgcc
gagctggccgccaagcggacgcgcgccgccgagatccaggggctcctcgacgacgagccg
gcccgttgggcgatcatcaaggccgagctgaagcacatcgtcaagacctacggcgacgag
cgacggacgaggatcgaggccccggccgcgccgatggagttccgcgaggaagactacatc
gtcgacgaggacgcctgggtcatcatcactcgcgaaggctggacgaagcggcagaagtcg
ttcaccgacgtggccagcatccgcgtccgcgacggggaccaggtcggctgggtgtaccgg
gcccgggcgcggcagacgatcacgctgttcaccgatcggggggtcggctacaccctccgc
gtcaacgacatccccatgacgaccggccacggcgacccgatccagaagcagttcgccttc
gaggaccaggagcggctcgtcggcgtcgtctgccacgacccgcggtgcatccccgatttc
gccaggttctcccagagcccggcgcggatggtccagcggacgctcgatgccgaggccgac
ggtgcggcggtcaacggcgacggccacgccgacgggtcgctcaacggccacgccggcggg
ccctcgatgccgccgccgccgtacgtcgtcgccctcacggccgggggcaagatcctccgc
ttcccgctggcgacgctcgccccggtctccacgaagaagggccggctcgtcgcccgactc
gacccgaccctcaagggagactccgtcgtcggcgtcgaggcgaccgacggctcggagaac
gtctgcctggcgaccaagcaggccagagtcctgatcttcccggtcaccgaggccaacgtc
gtctccgcggcggcgaggggcgtggcggcgatcaagctcgacgccaaggaccaggtcatc
ggcttcgtgctggcgaacaagaagcgcgaagggctcgccgtacgcaccaaccgcggcgcc
gagcagatcgtccgggcgaccaagtacccggtcaccggccgcggcggccgaggctacgcc
atcctccagcgcgggtcgctcgaatgcctcgttccgggcgaggccgagcccgtcccgcac
cccgatcaggtggccgaggccggcgacctccgacccaaatccgacgacccccgggattga
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