Planctomyces sp. SH-PL62: VT85_20930
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Entry
VT85_20930 CDS
T04401
Symbol
groL5
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT85_20930 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plh03019
]
VT85_20930 (groL5)
03110 Chaperones and folding catalysts [BR:
plh03110
]
VT85_20930 (groL5)
03029 Mitochondrial biogenesis [BR:
plh03029
]
VT85_20930 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plh04147
]
VT85_20930 (groL5)
Enzymes [BR:
plh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VT85_20930 (groL5)
Messenger RNA biogenesis [BR:
plh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VT85_20930 (groL5)
Chaperones and folding catalysts [BR:
plh03110
]
Heat shock proteins
HSP60 / Chaperonin
VT85_20930 (groL5)
Mitochondrial biogenesis [BR:
plh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VT85_20930 (groL5)
Exosome [BR:
plh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VT85_20930 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
VT85_20930 (groL5)
Exosomal proteins of breast cancer cells
VT85_20930 (groL5)
Exosomal proteins of colorectal cancer cells
VT85_20930 (groL5)
Exosomal proteins of bladder cancer cells
VT85_20930 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AMV39910
LinkDB
All DBs
Position
5327238..5328926
Genome browser
AA seq
562 aa
AA seq
DB search
MAKILAYDEEARQKLASGVGKLARAVRSTLGPRGRNAVIDKGWGAPTVTKDGVSVAEEIE
LTDPYENMGAQLVKEAASKTSDAAGDGTTTATVLAEAIFKEGLKALAAGADPMAIKRGID
KAVTAIVENVKSQAKKINGKKEIAEVAAIAANNDMSIGEKLADAFEKVGTDGVITVEEAK
GFETTVDVVEGMQFDRGYLSPHFVTDQDRMEVVLEDVYLLIHEEKVSSPTKLIPLLEKIA
KANKPLLIIAEDVEGEALATLVVNKLRGILKVAAVKAPGYGDRRKAMLEDIAILTGGKAI
FKDLGVDLDAVQLTDLGRARKVTITSEATTIVEGAGTSEAIKGRADAIRREVGTTDSEYD
KEKLQERLAKLAGGIAQINVGAATETEMKERKALVEDALHATRAAIEEGVVPGGGTALIR
ASKAIEGLKLEGDEQFGVDLIRRAAEQPARYIAENAGVDGAVVVNRVKKSNDANFGYNAE
SGAWGDLLAAGVVDPAKVTRTALQNAASVAGLLLTTEAMIAEPPKKPEAGGGHHDHHGGG
MDPMGGMGGMGGMGGMGGMGMM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagatactggcatacgatgaagaggcccgccagaagctggccagcggcgtcggc
aagctggcccgcgcggtccgcagcacgctcggcccgcggggtcggaacgccgtcatcgac
aaggggtggggagccccgacggtgacgaaggacggggtctccgtcgccgaggagatcgag
ctgaccgatccttacgagaacatgggcgcgcagctcgtgaaggaagcggcgtcgaagacc
tcggacgccgcgggcgacggcacgacgacggcgaccgtgctggccgaggccatcttcaag
gagggcctcaaggccctggccgccggcgccgacccgatggcgatcaagcgcgggatcgac
aaggccgtcacggccatcgtcgagaacgtcaagtcgcaggccaagaagatcaacggcaag
aaggagatcgccgaggtcgccgcgatcgccgccaacaacgacatgtcgatcggcgagaag
ctggccgacgcgttcgagaaggtcggcaccgacggcgtcatcaccgtcgaggaggccaag
ggcttcgagacgacggtcgacgtggtcgaggggatgcagttcgaccgcggctacctgagc
ccccacttcgtcaccgaccaggaccgcatggaggtcgtcctcgaggacgtctacctgctg
atccacgaggagaaggtcagctcccccaccaagctgatccccctgctcgagaagatcgcc
aaggccaacaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctggcgacc
ctggtcgtcaacaagctccgcggcatcctcaaggtcgcggccgtcaaggcccccggctac
ggcgaccgccgcaaggccatgctcgaggacatcgcgatcctcaccggcggcaaggccatc
ttcaaggacctgggcgtcgacctcgacgccgtccagctcaccgacctgggccgcgcccgc
aaggtgaccatcaccagcgaagcgaccaccatcgtcgagggcgccggcaccagcgaggcc
atcaagggccgcgccgacgccatccgtcgcgaggtcgggaccaccgacagcgagtacgac
aaggagaagctccaggagcggctcgccaagctcgccggcggcatcgcccagatcaacgtc
ggcgccgcgaccgagaccgagatgaaggagcgcaaggccctcgtcgaggacgccctgcac
gccacccgcgccgcgatcgaggaaggcgtcgtccccggcggcggcaccgccctgatccgc
gcctccaaggcgatcgagggcctcaagctcgaaggcgacgagcagttcggcgtcgacctg
atccgtcgcgccgccgagcagcccgcccgctacatcgccgagaacgccggcgtcgacggc
gcggtggtcgtcaatcgggtcaagaagtcgaacgacgccaacttcggctacaacgccgag
agcggcgcctggggcgacctcctggcggccggcgtcgtcgacccggccaaggtcacccgc
accgccctccagaacgccgcgtcggtggccggactcctcctcaccaccgaggccatgatc
gccgagcccccgaagaagccggaagccggcggcggccaccatgaccaccacggcggtggc
atggaccccatgggtggcatgggaggcatgggtggaatgggcggcatgggcggcatgggg
atgatgtga
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