Planctomyces sp. SH-PL62: VT85_21365
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Entry
VT85_21365 CDS
T04401
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plh03016
]
VT85_21365 (truB)
Enzymes [BR:
plh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VT85_21365 (truB)
Transfer RNA biogenesis [BR:
plh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT85_21365 (truB)
Prokaryotic type
VT85_21365 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMV39997
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All DBs
Position
complement(5435284..5436183)
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AA seq
299 aa
AA seq
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MSVEIVSVKPEWEGILNVDKPPGLTSRDVVNRVGRLLPKRVKAGHAGTLDPLATGVLVVC
IGPATRLIEYVQRMGKTYRSTFRLGARSDTHDVDGTVVATVDPQVPTLAEIEEALASQIG
EILQQPPEYSALKVAGRRAYDLARAGEVVELAPRPVHVGRIQILGYDWPRLEVEIDCGSG
TYIRSIARDVGEALGCGALMETLVRTRIGVFAQEEAVAPDDLDRDSFADALRPALDAVPD
LPRIALDEGQTADVLLGRRVVAEAPAGSQVALVAPDGRLLALGEAGPEGLWIQPRKVLG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgaaatcgtgagcgtgaagccggaatgggaagggatcttgaacgtcgacaag
ccgccggggctgacctcgcgcgacgtggtcaaccgcgtcgggcggctgctgccgaagcgg
gtcaaggcgggccacgccgggacgctcgacccgctggcgacaggcgtcctcgtggtctgc
atcggcccggcgacccgcctgatcgagtacgtccagcgcatggggaagacctaccgctcg
acgttccgcctgggcgcgcggagcgatacccacgacgtcgacggcaccgtcgtggcgacg
gtcgacccccaggtccccaccctcgccgagatcgaggaggcgctggcctcgcagatcggc
gagatcctccagcagccccccgaatattcggccctgaaggtcgccggccgccgcgcctac
gacctcgcccgcgccggcgaggtcgtggagctggcgccccggccggtccacgtcggccgc
atccagatcctggggtacgactggccccggctggaggtcgagatcgactgcgggagcggg
acctacatccgctcgatcgcgcgcgacgtcggcgaggcgctgggctgcggggccctgatg
gagaccctggtgcgcacccggatcggcgtcttcgcccaggaggaggccgtcgccccggac
gacctggatcgcgacagcttcgccgacgcgctgcggcccgcgctcgacgccgtccccgac
ctgccgaggatcgcgctggacgaggggcagacggccgacgtgctcctgggccgtcgcgtc
gtcgccgaggccccggccgggtcccaggtcgccctcgtcgcgcccgacggccgcctcctc
gcgctcggcgaggccggcccggagggcctctggatccagccccggaaggtgctgggatga
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