Planctomyces sp. SH-PL62: VT85_21620
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Entry
VT85_21620 CDS
T04401
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plh03016
]
VT85_21620 (truA)
Enzymes [BR:
plh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VT85_21620 (truA)
Transfer RNA biogenesis [BR:
plh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT85_21620 (truA)
Prokaryotic type
VT85_21620 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMV40048
UniProt:
A0A142YLE3
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All DBs
Position
complement(5498308..5499075)
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AA seq
255 aa
AA seq
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MRNIKLTISYDGTDFHGWQRQPELRTVQSVLDEAIERLNGGKRPNTNASGRTDAGVHALG
QVVHFLTAARHRPDVFLKALNAILPPDVRVLAAAEVPQAFHATLDARSKRYRYRIDNGQY
ASPFELRYAWHIFHRLDVDAMNRAASALLGRHDFRSFETDWPNRLSSVRTIYDVVASRHG
DLVHIEVEADGFLYNMVRSIAGTLSLVGTGKRPEGWVGEVLRAENRVEAGPTAPARGLFL
HHVNYDRPPEKASRP
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacatcaagctcacgatttcctacgacggcacggacttccacggatggcagcgc
cagcccgagctgcggaccgtgcagtcggttctggacgaggcgatcgagcggctcaacggc
gggaagcggccgaacaccaacgccagcggtcgcaccgacgccggggtccacgcgctgggc
caggtcgtccacttcctgaccgcggcgcggcacaggccggacgtcttcctgaaggcactc
aacgcgatcctgccgccggacgtccgggtgctggcggcggccgaggtcccgcaggccttc
cacgcgacgctcgacgcccgttccaagcgctaccgctatcggatcgacaacggccagtac
gccagcccgttcgagctgcggtacgcctggcacatcttccaccggctcgacgtcgacgcc
atgaaccgggccgcctcggcgctgctgggccggcacgacttccgcagcttcgagaccgac
tggcccaaccgcctcagctcggtgcggacgatctacgacgtggtcgcgagccggcacggc
gacctcgtccacatcgaggtcgaggccgacggcttcctctacaacatggtccgctccatc
gccgggaccctgtcgctggtcgggacggggaaacggcccgagggctgggtcggagaggtc
ctgcgggccgagaaccgcgtcgaggccgggcccacggcccccgcgcgcgggctgtttctg
caccacgtcaattacgaccgcccgccggagaaggcctcgcgcccatga
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